Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03225 and BL01423

See DNA alignment / Visit BSNT_03225 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:53
# Commandline: needle
#    -asequence pep-align/BSNT_03225___cgeE.1.5803.seq
#    -bsequence pep-align/BL01423___cgeE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03225___cgeE-BL01423___cgeE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03225___cgeE-BL01423___cgeE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03225___cgeE
# 2: BL01423___cgeE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 259
# Identity:     125/259 (48.3%)
# Similarity:   175/259 (67.6%)
# Gaps:           3/259 ( 1.2%)
# Score: 662.5
# 
#
#=======================================

BSNT_03225___      1 MTGHYSKTEHQYILLTSESASFDHYSVYRDPQLPQIFSHNFVQLHDTFPL     50
                     ||. .|.||.:|::||.......||.:|.|.::||:||.:|:||.|.|||
BL01423___cge      1 MTS-ISNTEDRYLMLTCSKKIESHYHIYTDEEIPQMFSSHFLQLQDDFPL     49

BSNT_03225___     51 ERLLNFLPSVPKLLDANYLHLKASPQHVFPLGLKQSLVKSGFVVEDELLY    100
                     ..|.:.|...|::|..||:|:|:|.:...|..:|:||...|:::::||.|
BL01423___cge     50 TELYSLLVRTPEILKRNYVHVKSSYKRDLPFTMKKSLFDLGYILDEELFY     99

BSNT_03225___    101 DMKLSDWKGQMGHPLTAWGTAKSLCDGSSIMKIYDSIYIGEAIAEQKLKR    150
                     .::|:||||........|||.|||.||..:|:.||::.|.||.|::||.|
BL01423___cge    100 SIRLADWKGDSPGVRAEWGTEKSLIDGCRMMQAYDTLSINEAFAKEKLLR    149

BSNT_03225___    151 KYPFYEAGIIILVVCYSDQAQKVPIGCGELFIDHQEKTAKIEEVAILDQF    200
                     ||||||.|||.|.||||::.:  ||||.||::||.|..|||||||||:.:
BL01423___cge    150 KYPFYEEGIIQLCVCYSEEGE--PIGCAELYLDHDENVAKIEEVAILEPY    197

BSNT_03225___    201 QRKGYGSILVKEMLSIAKSLGMEAAYLVAASTDGATQFYEKLTFKKYERV    250
                     |||||||.|:|:||:.||..|||:.|||.:.:|....|||||.|::.|::
BL01423___cge    198 QRKGYGSGLIKQMLTAAKQSGMESCYLVTSGSDQVKTFYEKLGFQQKEKL    247

BSNT_03225___    251 HTVFHYFLT    259
                     .|:|.|...
BL01423___cge    248 TTIFKYLFV    256


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