Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03225 and BL01423
See
Amino acid alignment /
Visit
BSNT_03225 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:53
# Commandline: needle
# -asequence dna-align/BSNT_03225___cgeE.1.5803.seq
# -bsequence dna-align/BL01423___cgeE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03225___cgeE-BL01423___cgeE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03225___cgeE-BL01423___cgeE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03225___cgeE
# 2: BL01423___cgeE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 882
# Identity: 507/882 (57.5%)
# Similarity: 507/882 (57.5%)
# Gaps: 213/882 (24.1%)
# Score: 1134.5
#
#
#=======================================
BSNT_03225___ 1 ATGACAGGACATTATTCAAAAACGGAACATCAATATATATTGTTAACGT- 49
.||||| ..||| ||||||.||.|||.|.|..|||.||.||.|.||.|
BL01423___cge 1 GTGACA-TCCAT--TTCAAACACAGAAGACCGTTATTTAATGCTGACATG 47
BSNT_03225___ 50 -----------CTGAATCGGCATCGTTTGATCATTACAGCGTATACAGAG 88
.|||||| .|| |.||||| .||||||.||
BL01423___cge 48 CAGCAAAAAAATTGAATC-CCA-----TTATCAT------ATATACACAG 85
BSNT_03225___ 89 ATCCGCAGCTTCCGCAAATTTTT---TCTCATAACTTTGTTCAGCTCCAT 135
||..|.||.|.|||||.||.||| |||||| |||.|.|||||.||.
BL01423___cge 86 ATGAGGAGATCCCGCAGATGTTTTCCTCTCAT---TTTCTGCAGCTGCAG 132
BSNT_03225___ 136 GATACG--TTTCCATTG---GAGCGGTTACTTAACTTTTTACCCT--CCG 178
| ||| |||||..|| ||||.|| ||| |||| .||
BL01423___cge 133 G--ACGATTTTCCGCTGACAGAGCTGT------ACT-----CCCTGCTCG 169
BSNT_03225___ 179 T------ACC--AAAGCTGCTTGATGCG-AATTATCTCCAT--------- 210
| ||| ||| ..||.|..|| ||||||.|.|||
BL01423___cge 170 TTCGGACACCCGAAA---TTTTAAAACGAAATTATGTTCATGTGAAAAGC 216
BSNT_03225___ 211 --TTAAAAGCG---TC-GCCGCAGCATGTTTTTCCGCTCGGTTTGAAGCA 254
|||.||||| || ||| ||||.|| .||||..|
BL01423___cge 217 TCTTATAAGCGGGATCTGCC---------TTTTACG------ATGAAAAA 251
BSNT_03225___ 255 GTCGC---TTGTAAAAAGC--GGTTTTGTCGTCGAGGATGAGCTACTATA 299
||||| ||| |.| ||.|.|.|..|.||.||.||..|..|.||
BL01423___cge 252 GTCGCTCTTTG-----ATCTTGGCTATATTCTTGATGAAGAATTGTTTTA 296
BSNT_03225___ 300 TGACATGAAGCTTAGTGACTGGAAGGGGCAGATGGGACATCC-----TTT 344
|..|||.|.||||...||.|||||.|| |||| ||| |.|
BL01423___cge 297 TTCCATCAGGCTTGCAGATTGGAAAGG--AGAT------TCCCCTGGTGT 338
BSNT_03225___ 345 AACCGCA---TGGGGGACGGCAAAAA---GTCTTTGCGACGGATCTTC-- 386
|...||| |||||||||| |.||| .||.|| ||||| ||.|
BL01423___cge 339 ACGGGCAGAGTGGGGGACGG-AGAAATCGCTCATT--GACGG--CTGCCG 383
BSNT_03225___ 387 TATTATGAAAATTTACGATTCCATT---TAT--ATTGGAGAAGCAATCGC 431
.||.|||.|...|||.|| |.|||| ||| || |||||..|.||
BL01423___cge 384 CATGATGCAGGCTTATGA-TACATTGTCTATCAAT----GAAGCGTTTGC 428
BSNT_03225___ 432 TGAACAAAAA-----TTAAAAAGAAAATATCCTTTCTATGAAGCAGGTAT 476
|||..|||| | ..|.||.||||||||.|||||.|.|||
BL01423___cge 429 -GAAGGAAAAGCTGCT----GCGCAAGTATCCTTTTTATGAGGAAGG--- 470
BSNT_03225___ 477 AATCATTC--TTGT-TGTTTGTTACAGCG--ACCAGGCACAGAAAGTTCC 521
.||||||| .||| |||.||.||| .|| |..|||| ||| ||
BL01423___cge 471 CATCATTCAGCTGTGTGTCTGCTAC-TCGGAAGAAGGC---GAA----CC 512
BSNT_03225___ 522 CATTGGGTGCGGCGAGCTGTTTATCGATC-ATCAAGA-GAAAACG--GCT 567
.|||||.||.|..|||| |||||| || ||||.|| ||||||| |||
BL01423___cge 513 GATTGGATGTGCTGAGC--TTTATC--TCGATCACGACGAAAACGTTGCT 558
BSNT_03225___ 568 AAAATCGAAGAAGTGGCAATTTTAGATCAGTTTCAAAGGAAGGGCTACGG 617
||||||||||||||.||.|||||.||.|..|..||..||||.|||||.||
BL01423___cge 559 AAAATCGAAGAAGTCGCCATTTTGGAGCCATACCAGCGGAAAGGCTATGG 608
BSNT_03225___ 618 CAGTAT-----CTTAGTGAAAGAAATGCTGTCCATCGCCAAATCACT-AG 661
|| |||| |.||..|.|||||..||..||||||| ||.| .|
BL01423___cge 609 ----ATCGGGCCTTA-TCAAGCAGATGCTCACCGCCGCCAAA-CAATCGG 652
BSNT_03225___ 662 GAATGGAAGCAGCCTA-CTTAGTGGCT---GCAAGCACTGACGGTGCAAC 707
|.||||||.|...||| ||| ||..|| |.||||..|.| ||||.||
BL01423___cge 653 GCATGGAATCGTGCTATCTT-GTAACTTCGGGAAGCGATCA-GGTGAAA- 699
BSNT_03225___ 708 TCA-GTTTTACGAAAAGCTGACGTTTAA--------AAAATATGAGCGGG 748
| ||||||.|||||||||...|||.| ||||..|.| ||
BL01423___cge 700 --ACGTTTTATGAAAAGCTGGGCTTTCAGCAGAAGGAAAAGCTCA-CG-- 744
BSNT_03225___ 749 TGCATACTGTATTTCATTATTTCCTTACATGA 780
||..|||||.|.|||||..|...||.|
BL01423___cge 745 -----ACAATATTTAAATATTTGTTCGTATAA 771
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.