Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03234 and BL01422

See DNA alignment / Visit BSNT_03234 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:53
# Commandline: needle
#    -asequence pep-align/BSNT_03234___msrB.1.5803.seq
#    -bsequence pep-align/BL01422___msrB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03234___msrB-BL01422___msrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03234___msrB-BL01422___msrB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03234___msrB
# 2: BL01422___msrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 151
# Identity:     111/151 (73.5%)
# Similarity:   127/151 (84.1%)
# Gaps:           7/151 ( 4.6%)
# Score: 625.0
# 
#
#=======================================

BSNT_03234___      1 MAYNKEEKIKSLNRMQYEVTQNNGTEPPFQNEYWDHKEEGLYVDIVSGKP     50
                     |..||||::|.|.||||||||.|||||||||||||..|:|:|||||||||
BL01422___msr      1 MTNNKEERLKQLTRMQYEVTQKNGTEPPFQNEYWDLHEDGIYVDIVSGKP     50

BSNT_03234___     51 LFTSKDKFDSHCGWPSFTKPIEEEEVEEKLDTSHGMIRTEVRSRTADSHL    100
                     ||:|.||||:||||||||||::..|:|||||||||||||||||::|||||
BL01422___msr     51 LFSSLDKFDAHCGWPSFTKPVDAGEIEEKLDTSHGMIRTEVRSKSADSHL    100

BSNT_03234___    101 GHVFNDGPGPNGLRYCINSAALRFVPKHKLKEEGYESYLHLFNK------    144
                     ||||.|||||:||||||||||||||||..|::|||..|:.||.:      
BL01422___msr    101 GHVFPDGPGPDGLRYCINSAALRFVPKDDLEKEGYGEYVKLFERKKSGEE    150

BSNT_03234___    144 -    144
                      
BL01422___msr    151 S    151


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.