Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03234 and BL01422
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:54
# Commandline: needle
# -asequence dna-align/BSNT_03234___msrB.1.5803.seq
# -bsequence dna-align/BL01422___msrB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03234___msrB-BL01422___msrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03234___msrB-BL01422___msrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03234___msrB
# 2: BL01422___msrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 468
# Identity: 331/468 (70.7%)
# Similarity: 331/468 (70.7%)
# Gaps: 45/468 ( 9.6%)
# Score: 1182.0
#
#
#=======================================
BSNT_03234___ 1 ATGGCGTACAATAAAGAAGAA------AAAATAAAGTCA-TTAAATCGCA 43
|||.||.|||||||||||||| ||| || .|.|..||.|
BL01422___msr 1 ATGACGAACAATAAAGAAGAACGGCTGAAA-------CAGCTGACCCGGA 43
BSNT_03234___ 44 TGCAATATGAAGTAACGCAAAATAACGGCACGGAGCCGCCATTTCAAAAT 93
|||||||||||||||||||.||.|||||.||||||||.|||||.|||||.
BL01422___msr 44 TGCAATATGAAGTAACGCAGAAAAACGGGACGGAGCCTCCATTCCAAAAC 93
BSNT_03234___ 94 GAATATTGGGATCATAAGGAAGAAGGGTTGTATGTAGACATTGTGTCAGG 143
||.||.|||||.|...|.|||||.|||.|.|||||.||.||.||.|||||
BL01422___msr 94 GAGTACTGGGACCTGCATGAAGACGGGATCTATGTCGATATCGTTTCAGG 143
BSNT_03234___ 144 CAAGCCATTGTTTACATCCAAGGATAAATTTGATTCCCACTGCGGCTGGC 193
.|||||..|||||.||||....||.||||||||..|.|||||||||||||
BL01422___msr 144 GAAGCCGCTGTTTTCATCGCTTGACAAATTTGACGCACACTGCGGCTGGC 193
BSNT_03234___ 194 CAAGCTTTACAAAGCCGATTGAAGAGGAAGAAGTGGAAGAAAAACTGGAC 243
|||||||.|||||.|||.|.||.|..|.||||.|.||||||||.||||||
BL01422___msr 194 CAAGCTTCACAAAACCGGTCGATGCCGGAGAAATCGAAGAAAAGCTGGAC 243
BSNT_03234___ 244 ACGAGCCACGGCATGATTCGCACAGAAGTAAGAAGCCGAA--CTGCTGAT 291
||....||||||||||||||.||.||.||.|||||| || ||||.|||
BL01422___msr 244 ACTTCACACGGCATGATTCGGACTGAGGTGAGAAGC--AAGTCTGCCGAT 291
BSNT_03234___ 292 TCTCATCTTGGCCACGTATTTAATGACGGACCTGGTCCAAACGGACTTCG 341
||.||||||||.|||||.|||...||||||||.||.||..||||.||.||
BL01422___msr 292 TCCCATCTTGGACACGTGTTTCCGGACGGACCCGGACCGGACGGCCTGCG 341
BSNT_03234___ 342 TTACTGCATAAATTCAGCAGCGCTGCGGTTTGTTCCGAAGCATAAGCTAA 391
.||.|||||.||||||||.||.||.||||||||.||||||.|..|.||..
BL01422___msr 342 CTATTGCATCAATTCAGCCGCCCTCCGGTTTGTGCCGAAGGACGACCTTG 391
BSNT_03234___ 392 AAGAAGAAGGATACGAAAGC---TATCTGCATCTCTTT------AATAAA 432
|..|||||||||||| || |||.|..|.||.||| ||.|||
BL01422___msr 392 AGAAAGAAGGATACG---GCGAATATGTCAAACTGTTTGAACGCAAGAAA 438
BSNT_03234___ 433 T---------AA------ 435
| ||
BL01422___msr 439 TCCGGAGAGGAAAGCTGA 456
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