Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03236 and BL01421
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:54
# Commandline: needle
# -asequence pep-align/BSNT_03236___msrA.1.5803.seq
# -bsequence pep-align/BL01421___msrA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03236___msrA-BL01421___msrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03236___msrA-BL01421___msrA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03236___msrA
# 2: BL01421___msrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 181
# Identity: 140/181 (77.3%)
# Similarity: 157/181 (86.7%)
# Gaps: 4/181 ( 2.2%)
# Score: 796.0
#
#
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BSNT_03236___ 1 MSEKKEIATFAGGCFWCMVKPFDEQPGIEKVVSGYTGGHTENPTYEEVCS 50
|:||:|:|||||||||||||||||||||.||.||||||||||||||||||
BL01421___msr 1 MAEKRELATFAGGCFWCMVKPFDEQPGILKVESGYTGGHTENPTYEEVCS 50
BSNT_03236___ 51 ETTGHREAVQITFNPDVFPYEKLLELFWQQIDPTDAGGQFADRGSSYRAA 100
.||||||||||||:||||||||||||:||||||||:||||.|||.|||.|
BL01421___msr 51 NTTGHREAVQITFDPDVFPYEKLLELYWQQIDPTDSGGQFTDRGESYRTA 100
BSNT_03236___ 101 IFYHNDKQKELAEASKQRLAESGIFKDPIVTDILKAEPFYEAEGYHQHFY 150
||||||||::|||.||::|.|||||||||.||||:|.|||.||.|||.::
BL01421___msr 101 IFYHNDKQRKLAEESKKKLGESGIFKDPIATDILEAGPFYPAEEYHQDYH 150
BSNT_03236___ 151 KKNPAHYQRYRTGSGRAGFISEHWGAK---- 177
||:|..|.:||.||||.||:.:|||.|
BL01421___msr 151 KKHPERYTQYRIGSGREGFLQQHWGRKHDEQ 181
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