Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04502 and BL01418
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:42
# Commandline: needle
# -asequence pep-align/BSNT_04502___glgC.1.5803.seq
# -bsequence pep-align/BL01418___glgC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04502___glgC-BL01418___glgC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04502___glgC-BL01418___glgC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04502___glgC
# 2: BL01418___glgC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 381
# Identity: 257/381 (67.5%)
# Similarity: 314/381 (82.4%)
# Gaps: 3/381 ( 0.8%)
# Score: 1391.5
#
#
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BSNT_04502___ 1 MKKQCVAMLLAGGKGSRLSGLTKNMAKPAVSFGGKYRIIDFTLSNCSNSG 50
||:|||||||||||||||:.||||:|||||.||||||||||.||||:|||
BL01418___glg 1 MKEQCVAMLLAGGKGSRLNALTKNLAKPAVPFGGKYRIIDFALSNCANSG 50
BSNT_04502___ 51 IDTVGILTQYQPLELNSYIGIGSAWDLDRYNGGVTVLPPYAESSEVKWYK 100
|..||:|||||||.||||||||..|||||.:|||::|.||||:|||||||
BL01418___glg 51 IHHVGVLTQYQPLLLNSYIGIGEPWDLDRNDGGVSILSPYAEASEVKWYK 100
BSNT_04502___ 101 GTASAIYENLNYLNQYDPEYVLILSGDHIYKMDYGKMLDYHIEKKADVTI 150
|||||||||.::|.:..||:||||||||||||||||||:||.||:||.||
BL01418___glg 101 GTASAIYENRHFLKELQPEHVLILSGDHIYKMDYGKMLEYHAEKQADATI 150
BSNT_04502___ 151 SVIEVGWEEASRFGIMKANPDGTITHFDEKPKFPKSNLASMGIYIFNWPL 200
:||||.|.||.||||:..|....||.|:||||:|||||||||:|:|.|.:
BL01418___glg 151 AVIEVSWAEAGRFGILHTNDKMEITSFEEKPKYPKSNLASMGVYVFKWSV 200
BSNT_04502___ 201 LKQYLEMDDQNPYSSHDFGKDIIPLLLEEKKKLSAYPFKGYWKDVGTVQS 250
|:..||.|::|..||||||||:||.||||.|:|:||||||||||||||:|
BL01418___glg 201 LEDALERDEKNSASSHDFGKDVIPALLEENKRLNAYPFKGYWKDVGTVRS 250
BSNT_04502___ 251 LWEANMDLLKEDSELKLFERKWKIYSVNPNQPPQFISSDAQVQDSLVNEG 300
|||||||||.:...|.||||.|:||||:||.||||::..|::::|||:||
BL01418___glg 251 LWEANMDLLGDHPPLDLFERNWRIYSVSPNLPPQFVADLAEIKESLVSEG 300
BSNT_04502___ 301 CVVYGNVSHSVLFQGVTVGKHTTVTSSVIMPDVTIGEHVVIENAIVPNGM 350
|.|||:|:.||:||.|.:|:|:.:..||:|.||:|||:|.||||||..|:
BL01418___glg 301 CTVYGSVTRSVIFQRVAIGRHSAIKRSVVMHDVSIGEYVEIENAIVSAGI 350
BSNT_04502___ 351 VLPDGAVIRSEKDIEEVLLVSEEFVEKELI- 380
.:|||...:.|.. ||||::||:|:|..:
BL01418___glg 351 RIPDGFCAKPEDG--EVLLITEEYVKKHKVV 379
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