Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04502 and BL01418
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:42
# Commandline: needle
# -asequence dna-align/BSNT_04502___glgC.1.5803.seq
# -bsequence dna-align/BL01418___glgC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04502___glgC-BL01418___glgC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04502___glgC-BL01418___glgC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04502___glgC
# 2: BL01418___glgC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1196
# Identity: 806/1196 (67.4%)
# Similarity: 806/1196 (67.4%)
# Gaps: 109/1196 ( 9.1%)
# Score: 2509.5
#
#
#=======================================
BSNT_04502___ 1 ATGAAAAAACAATGTGTAGCCATGCTCCTTGCCGGCGGAAAGGGCAGCCG 50
||||||.||||||||||.||.|||||..|.||.|||||.|||||.|||.|
BL01418___glg 1 ATGAAAGAACAATGTGTGGCTATGCTTTTGGCAGGCGGCAAGGGAAGCAG 50
BSNT_04502___ 51 TCTCAGCGGATTAACAAAAAATATGGCCAAACCGGCTGTATCTTTCGGGG 100
.||.|..|..|||||.|||||..|.||.|||||.||.||..|.||.||.|
BL01418___glg 51 GCTGAATGCCTTAACCAAAAACCTCGCAAAACCCGCCGTTCCATTTGGCG 100
BSNT_04502___ 101 GAAAATACAGGATTATTGATTTTACCCTAAGCAACTGTTCTAATTCAGGC 150
|.||.|||||.||.||.||||||.||||.||||||||..|.||.||.||.
BL01418___glg 101 GCAAGTACAGAATCATCGATTTTGCCCTCAGCAACTGCGCCAACTCGGGA 150
BSNT_04502___ 151 ATAGACA-CA-GTCGGGATTTTAACGCAATATCAGCCGCTTGAACTGAAT 198
|| .|| || |||||..|..|.||.|||||.|||||.|||..|.|.||.
BL01418___glg 151 AT--TCATCATGTCGGTGTGCTGACTCAATACCAGCCTCTTTTATTAAAC 198
BSNT_04502___ 199 TCCTATATTGGGATCGGC-AGTGCATGGGACCTGGATAGATATAATGGCG 247
||.|||||.||.|||||| || .|||||||.||.||..|..||.|.||.|
BL01418___glg 199 TCATATATCGGAATCGGCGAG-CCATGGGATCTTGACCGCAATGACGGAG 247
BSNT_04502___ 248 GCGTGACGGTTTTACCCCCTTATGCCGAGTCATCAGAAGTCAAATGGTAT 297
|.||..|..|||||.||||||||||.||..|.||.|||||.||.|||||.
BL01418___glg 248 GGGTCTCCATTTTATCCCCTTATGCTGAAGCGTCGGAAGTGAAGTGGTAC 297
BSNT_04502___ 298 AAAGGGACGGCAAGCGCCATTTATGAAAATCTCAATTATTTGAATCAGTA 347
|||||||||||.|||||.|||||||||||.|.|.|||.|||.||..||..
BL01418___glg 298 AAAGGGACGGCTAGCGCGATTTATGAAAACCGCCATTTTTTAAAGGAGCT 347
BSNT_04502___ 348 TGATCCTGAGTATGTACTGATTTTATCAGGAGATCACATATACAAAATGG 397
|.|.|||||..|||||||.||..|||||||||||||.||.||||||||||
BL01418___glg 348 TCAGCCTGAACATGTACTCATCCTATCAGGAGATCATATCTACAAAATGG 397
BSNT_04502___ 398 ACTACGGCAAAATGCTTGATTATCACATTGAAAAGAAAGCAGATGTGACC 447
|||||||.||||||||.||.||.|||...||.||..||||.||.|..|||
BL01418___glg 398 ACTACGGAAAAATGCTCGAATACCACGCGGAGAAACAAGCTGACGCCACC 447
BSNT_04502___ 448 ATCTCTGTCATCGAAGTGGGCTGGGAGGAAGCAAGCCGATTCGGCATC-- 495
|||.|.|||||.|||||..||||||..|||||..||||.|||||||||
BL01418___glg 448 ATCGCAGTCATTGAAGTCAGCTGGGCAGAAGCCGGCCGTTTCGGCATCCT 497
BSNT_04502___ 496 ----ATGAAGGCCAATCCAGATGGGACGATCACACATTTTGATGAAAAGC 541
|.|||.|.|| |||||| .|||.|||...||.||.|||||||
BL01418___glg 498 TCATACGAATGACA----AGATGG--AGATTACAAGCTTCGAGGAAAAGC 541
BSNT_04502___ 542 CCAAATTCCCTAAGAGCAATCTTGCCTCAATGGGAATTTATATATTCAAT 591
|.||||..||.|||||||||.|.||.||||||||..|.||..|.||.||.
BL01418___glg 542 CGAAATATCCAAAGAGCAATTTGGCATCAATGGGTGTCTACGTTTTTAAA 591
BSNT_04502___ 592 TGGCCGCTT--TTGAA-ACAGTATCTTGAGATGGA---CGATCAAAACCC 635
||| .||.| ||||| | ||.|.|||| ||||.||||...
BL01418___glg 592 TGG-AGCGTGCTTGAAGA--------TGCGTTGGAACGCGATGAAAAAAA 632
BSNT_04502___ 636 TT---ATTCTAGCCACGACTTCGGCAAAGACATTATTCC-TCTGCTTTTG 681
|| ..||.||||||||.|||||.|||||..|.||||| .|| |||.|.
BL01418___glg 633 TTCCGCGTCAAGCCACGATTTCGGAAAAGATGTCATTCCGGCT-CTTCTC 681
BSNT_04502___ 682 GAGGAGAAAAAGAAGCTTTCTGCTTATCCGTTCAAGGGATATTGGAAGGA 731
||.||.||.||||.|||....|||||||||||.||.|||||.||||||||
BL01418___glg 682 GAAGAAAATAAGAGGCTGAACGCTTATCCGTTTAAAGGATACTGGAAGGA 731
BSNT_04502___ 732 TGTCGGAACGGTGCAG-AGCTTGTGGGAAGCCAATATGGATTTGTTAAAA 780
||||||.||||| ||| ||.||.||||||||||||||||||.||.|...|
BL01418___glg 732 TGTCGGTACGGT-CAGAAGTTTATGGGAAGCCAATATGGATCTGCTTGGA 780
BSNT_04502___ 781 GAGGA--CTCGGAGCTGAAGCTGTTTGAACGCAAATGGAAAATTTACTCC 828
||..| ||| .|||..|.|||||.|||||.||.|||...|||||.||.
BL01418___glg 781 GATCATCCTC--CGCTTGACCTGTTCGAACGGAACTGGCGGATTTATTCA 828
BSNT_04502___ 829 GTCAATCCAAATCAGCCTCCGCAATTTATTTC--ATCTGATGCGCAGGTT 876
|||...||.||||..||.|||||.|||.||.| ||||| |||.|..|.
BL01418___glg 829 GTCTCCCCGAATCTCCCGCCGCAGTTTGTTGCCGATCTG--GCGGAAATC 876
BSNT_04502___ 877 CAAGATTCGCTTGTGAACGAAGGTTGTGTTGTATATGGAAATGTGTC--T 924
.||||.|||||.||.|.||||||.||....||.||||| ||| |
BL01418___glg 877 AAAGAATCGCTCGTCAGCGAAGGATGCACCGTGTATGG------GTCGGT 920
BSNT_04502___ 925 CACTCCGTTC-----TTTTTCAAGGTGTGACTGTCGGTAAGCATACGACT 969
||| |||||| |.|||||..|.||..|..||||.|..|||.|..|
BL01418___glg 921 CAC-CCGTTCGGTTATATTTCAGCGCGTTGCCATCGGCAGACATTCCGC- 968
BSNT_04502___ 970 GTTACATCA-----TCCGTCATAATGCCGGATGTGACGATTGGGGAGCAT 1014
||||| ||.|||.|.||||..||.||..|.|||||.|||.||
BL01418___glg 969 ----CATCAAACGTTCAGTCGTGATGCATGACGTTTCAATTGGAGAGTAT 1014
BSNT_04502___ 1015 GTAGTCATTGAAAATGCCATCGTTCCTAATGGGATGG--TGC---TGCCG 1059
||.|..||.|||||||||||.|| ||.||..|| |.| |.|||
BL01418___glg 1015 GTTGAGATCGAAAATGCCATTGT-----ATCGGCAGGAATTCGAATTCCG 1059
BSNT_04502___ 1060 GATG--------GCGCAGTGATTCGCTCCGAAAAAGACATTGAAGAGGTG 1101
||.| |||.|| |||.||.| ||..||.||.
BL01418___glg 1060 GACGGTTTTTGCGCGAAG---------CCGGAAGA-----TGGCGAAGTC 1095
BSNT_04502___ 1102 CTGCTCGTTTCAGAGGAATTTGTAGAAAAAGA----ATTGATTTAA 1143
|||||..|..|||||||.|.|||..|||||.| .||| |||||
BL01418___glg 1096 CTGCTGATCACAGAGGAGTATGTCAAAAAACATAAGGTTG-TTTAA 1140
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