Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05887 and BL01413
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:57
# Commandline: needle
# -asequence pep-align/BSNT_05887___menA.1.5803.seq
# -bsequence pep-align/BL01413___menA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05887___menA-BL01413___menA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05887___menA-BL01413___menA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05887___menA
# 2: BL01413___menA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 311
# Identity: 185/311 (59.5%)
# Similarity: 226/311 (72.7%)
# Gaps: 18/311 ( 5.8%)
# Score: 928.0
#
#
#=======================================
BSNT_05887___ 1 ----------------MGQILWQLTRPHTLTASFVPVLLGTVLAMFYVKV 34
..::.|.|||||||||:||||.||||:::...|:
BL01413___men 1 MQHQSLSGSVSEIKPEKWRVWWMLTRPHTLTAAFVPVTLGTVMSLESGKI 50
BSNT_05887___ 35 DLLLFLAMLFSCLWIQIATNLFNEYYDFKRGLDTAESVGIGGAIVRHGMK 84
|:.||||||.:.:.|||.|||||||:||.||||...||||||||||:|||
BL01413___men 51 DIWLFLAMLAASILIQIGTNLFNEYFDFVRGLDNENSVGIGGAIVRYGMK 100
BSNT_05887___ 85 PKTILQLALASYGIAILLGVYICASSSWWLALIGLVGMAIGYLYTGGPLP 134
|||:|.||...:|.|:||||||||||||||||||||.||:||||||||.|
BL01413___men 101 PKTVLYLAYGLFGAAVLLGVYICASSSWWLALIGLVCMAVGYLYTGGPFP 150
BSNT_05887___ 135 IAYTPFGELFSGICMGSVFVLISFFIQTDMINTQSILISIPIAILVGAIN 184
|:||||||:.||:.||.|.:|||::|||..:.....|||:||.||||.||
BL01413___men 151 ISYTPFGEIMSGVFMGMVIILISYYIQTGGLTWNVFLISLPITILVGGIN 200
BSNT_05887___ 185 LSNNIRDIEEDKKGGRKTLAILMGHKGAVTLLAASFAVAYIWVVGLVI-T 233
|||||||:..||:.|||||.||.|.|.||.:|:..|||:|| ::|:.| .
BL01413___men 201 LSNNIRDLVGDKENGRKTLPILAGRKNAVQILSWVFAVSYI-LIGIYIGF 249
BSNT_05887___ 234 GAASPWLFVVFLSVPKPVQAVKGFVQKEMPMNMIVAMKSTAQTNTFFGFL 283
...|.|..:|.||:|||::|::.|..||.|..::||||||||||||||.|
BL01413___men 250 EIVSLWSCLVLLSLPKPIKAIQEFKAKEKPAELMVAMKSTAQTNTFFGLL 299
BSNT_05887___ 284 LSIGLLISYFR 294
|:|.|||.|..
BL01413___men 300 LAIALLIQYVF 310
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