Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03779 and BL01409

See DNA alignment / Visit BSNT_03779 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:49
# Commandline: needle
#    -asequence pep-align/BSNT_03779___yqfC.1.5803.seq
#    -bsequence pep-align/BL01409___yqfC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03779___yqfC-BL01409___yqfC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03779___yqfC-BL01409___yqfC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03779___yqfC
# 2: BL01409___yqfC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 93
# Identity:      80/93 (86.0%)
# Similarity:    88/93 (94.6%)
# Gaps:           0/93 ( 0.0%)
# Score: 425.0
# 
#
#=======================================

BSNT_03779___      1 MGQRKNRMKAWLTRALEIPPDVMMDLPRITMVGRLHIYIENHRGLLLFSE     50
                     |.|||||:||||||.||||||||||||||||:|||||||||||||||||:
BL01409___yqf      1 MAQRKNRIKAWLTRTLEIPPDVMMDLPRITMIGRLHIYIENHRGLLLFSD     50

BSNT_03779___     51 NEVRLMLKQGQCIISGKNFVIKAILPEEILLEGTIDVVRYVES     93
                     .|||||||||||||.||:||||.||||||||||||::|||::|
BL01409___yqf     51 TEVRLMLKQGQCIIQGKDFVIKTILPEEILLEGTIELVRYIDS     93


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.