Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03779 and BL01409

See Amino acid alignment / Visit BSNT_03779 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:49
# Commandline: needle
#    -asequence dna-align/BSNT_03779___yqfC.1.5803.seq
#    -bsequence dna-align/BL01409___yqfC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03779___yqfC-BL01409___yqfC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03779___yqfC-BL01409___yqfC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03779___yqfC
# 2: BL01409___yqfC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 283
# Identity:     226/283 (79.9%)
# Similarity:   226/283 (79.9%)
# Gaps:           2/283 ( 0.7%)
# Score: 890.0
# 
#
#=======================================

BSNT_03779___      1 ATGGGGCAAAGAAAGAATCGTATGAAAGCTTGGCTGACAAGAGCATTGGA     50
                     ||||.|||||||||.||.||.||.|||||.||||||||||||.||.||||
BL01409___yqf      1 ATGGCGCAAAGAAAAAACCGCATCAAAGCGTGGCTGACAAGAACACTGGA     50

BSNT_03779___     51 AATTCCCCCGGACGTTATGATGGATCTGCCGAGGATTACAATGGTTGGCA    100
                     |||||||||.||.||.|||||||||||.|||||.|||||.|||.|.||.|
BL01409___yqf     51 AATTCCCCCTGATGTCATGATGGATCTTCCGAGAATTACGATGATAGGAA    100

BSNT_03779___    101 GACTTCATATCTACATAGAAAACCACAGAGGCCTTTTGCTTTTCAGTGAG    150
                     |||||||.||.||.||.||||||||||||||.||||||||||||||.||.
BL01409___yqf    101 GACTTCACATATATATTGAAAACCACAGAGGGCTTTTGCTTTTCAGCGAT    150

BSNT_03779___    151 AATGAAGTGAGGCTGATGCTGAAGCAGGGCCAGTGCATCATATC-TGGTA    199
                     |..|||||.|||||||||||.||.|||||.||||||||||| || .||.|
BL01409___yqf    151 ACGGAAGTAAGGCTGATGCTCAAACAGGGGCAGTGCATCAT-TCAAGGCA    199

BSNT_03779___    200 AAAATTTTGTCATCAAGGCGATTCTTCCGGAAGAGATACTTTTGGAGGGT    249
                     ||.|.|||||||||||..|||||.|.||.||.||.||.||..|.||.||.
BL01409___yqf    200 AAGACTTTGTCATCAAAACGATTTTGCCTGAGGAAATTCTGCTTGAAGGC    249

BSNT_03779___    250 ACGATTGATGTCGTTCGATATGTTGAGTCATAA    282
                     ||||||||..|.||.||.|||.|.||.||||||
BL01409___yqf    250 ACGATTGAGCTTGTCCGCTATATCGATTCATAA    282


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