Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03778 and BL01408
See
DNA alignment /
Visit
BSNT_03778 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:49
# Commandline: needle
# -asequence pep-align/BSNT_03778___yqfD.1.5803.seq
# -bsequence pep-align/BL01408___yqfD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03778___yqfD-BL01408___yqfD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03778___yqfD-BL01408___yqfD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03778___yqfD
# 2: BL01408___yqfD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 398
# Identity: 278/398 (69.8%)
# Similarity: 342/398 (85.9%)
# Gaps: 0/398 ( 0.0%)
# Score: 1520.0
#
#
#=======================================
BSNT_03778___ 1 MKNKWLSFFSGKVQLELTGRGIERLLNECTRQGIPVFHVKKKKEAVSLYI 50
||||||||||||:||::||:|||||||||||:.||:|:|||||:||.|||
BL01408___yqf 1 MKNKWLSFFSGKIQLKITGKGIERLLNECTRRNIPMFNVKKKKDAVFLYI 50
BSNT_03778___ 51 QLQDVHAFRRVRSKFKCKARFIHRKGFPFLLLKSKLNIGFTIGFAIFFIL 100
.|.||||||:|...|.||.|||.|||||||:.|||.|.|||.|.|.|||:
BL01408___yqf 51 PLSDVHAFRKVIRGFDCKCRFIKRKGFPFLVQKSKRNSGFTFGVAAFFII 100
BSNT_03778___ 101 LFLLSNMVWKIDVTGAKPETEHQMRQHLNEIGVKKGRLQFLMMSPEKIQK 150
:||||||:||||:|||.||||||:||.|::|||||||.||.|::|||||:
BL01408___yqf 101 MFLLSNMLWKIDITGANPETEHQIRQQLDQIGVKKGRFQFSMLTPEKIQQ 150
BSNT_03778___ 151 SLTNGIDNITWVGVDLKGTTIHMKVVEKNEPEKEKYVSPRNIVAKKKATI 200
:||..::||||||::|.||.:||||||||||:||||:.||:|||||.|||
BL01408___yqf 151 ALTKRVENITWVGIELNGTALHMKVVEKNEPDKEKYIGPRHIVAKKGATI 200
BSNT_03778___ 201 TRMFVQKGQPMAAIHDHVEKGQLLVSGLIGSEDHQQEVASKAEIYGETWY 250
::|||:||:|:..::.||||||:|||||||||:.:|:|.:|.:|||||||
BL01408___yqf 201 SKMFVEKGEPLVTVNQHVEKGQMLVSGLIGSEEEKQKVGAKGKIYGETWY 250
BSNT_03778___ 251 RSEVTVPLETLFNVYTGKVRTKHKLSFGSLAIPIWGMTFKKEELKHPKTE 300
:|.|||||||.|:|:||||||.||||.||.::||||.:||||:...||||
BL01408___yqf 251 KSTVTVPLETSFDVFTGKVRTSHKLSLGSFSVPIWGFSFKKEDFSRPKTE 300
BSNT_03778___ 301 QEKHSLHFLGFKLPVSYVKEQTRESEEALRKYTKEEAVQEGIKLGKQDVE 350
.|||||||:.|||||:|.||..||||:..|.|:|:|||.|||::||:|:.
BL01408___yqf 301 TEKHSLHFMNFKLPVAYEKEHMRESEQIKRVYSKKEAVLEGIEMGKRDIR 350
BSNT_03778___ 351 DKIGENGEVKSEKVLHQTVENGKVKLIILYQVIEDIVQTTPIVRETEE 398
.|||.:|.:.||||||:|.|||||||||||||||:||||||||:||:|
BL01408___yqf 351 KKIGRDGNIISEKVLHETSENGKVKLIILYQVIENIVQTTPIVQETKE 398
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.