Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_06250 and BL01401

See DNA alignment / Visit BSNT_06250 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:13
# Commandline: needle
#    -asequence pep-align/BSNT_06250___yyaQ.1.5803.seq
#    -bsequence pep-align/BL01401___yyaQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06250___yyaQ-BL01401___yyaQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06250___yyaQ-BL01401___yyaQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06250___yyaQ
# 2: BL01401___yyaQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 118
# Identity:      97/118 (82.2%)
# Similarity:   110/118 (93.2%)
# Gaps:           1/118 ( 0.8%)
# Score: 527.0
# 
#
#=======================================

BSNT_06250___      1 MLTREDIFKHVKEKYGTSPDYPWVKYPNYASLRHTSNKKWYGLIMNVLPE     50
                     ||||||||||||||:|||||||:.|:||||:|||.:.:|||||:||||||
BL01401___yya      1 MLTREDIFKHVKEKFGTSPDYPFQKFPNYAALRHETTEKWYGLVMNVLPE     50

BSNT_06250___     51 KLGLDGHGEIDILNLKCPPEISDSLRNGENILPGYHMDKEHWISIVLERT    100
                     ||||||:.||||||||||||||.|||||::||||||||||:||||||||.
BL01401___yya     51 KLGLDGNDEIDILNLKCPPEISGSLRNGKSILPGYHMDKENWISIVLERI    100

BSNT_06250___    101 DPEGEIYNLIEQSFHLTK    118
                     |.| |:||||||||:|||
BL01401___yya    101 DSE-EVYNLIEQSFNLTK    117


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.