Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06250 and BL01401

See Amino acid alignment / Visit BSNT_06250 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:13
# Commandline: needle
#    -asequence dna-align/BSNT_06250___yyaQ.1.5803.seq
#    -bsequence dna-align/BL01401___yyaQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06250___yyaQ-BL01401___yyaQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06250___yyaQ-BL01401___yyaQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06250___yyaQ
# 2: BL01401___yyaQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 357
# Identity:     296/357 (82.9%)
# Similarity:   296/357 (82.9%)
# Gaps:           3/357 ( 0.8%)
# Score: 1237.0
# 
#
#=======================================

BSNT_06250___      1 ATGTTAACAAGAGAAGATATCTTTAAACACGTCAAAGAAAAATACGGTAC     50
                     ||||||||||||||||||||||||||.||||||||||||||||.|||.||
BL01401___yya      1 ATGTTAACAAGAGAAGATATCTTTAAGCACGTCAAAGAAAAATTCGGGAC     50

BSNT_06250___     51 ATCGCCTGATTACCCGTGGGTGAAATACCCAAACTATGCTTCTTTGAGAC    100
                     ||||||.||||||||.|.....||||..|||||||||||..||||.||||
BL01401___yya     51 ATCGCCAGATTACCCATTTCAAAAATTTCCAAACTATGCCGCTTTAAGAC    100

BSNT_06250___    101 ATACATCAAACAAAAAATGGTACGGTCTTATCATGAATGTTCTCCCAGAA    150
                     ||..|.|.|.|.||||||||||.||||||.|.|||||||||||.||.|||
BL01401___yya    101 ATGAAACTACCGAAAAATGGTATGGTCTTGTAATGAATGTTCTTCCGGAA    150

BSNT_06250___    151 AAATTAGGCTTGGATGGTCATGGCGAAATAGATATTCTAAATCTAAAATG    200
                     ||.||||||||.|||||..|||.|||||||||||||||.|||.|||||||
BL01401___yya    151 AAGTTAGGCTTAGATGGAAATGACGAAATAGATATTCTGAATTTAAAATG    200

BSNT_06250___    201 TCCCCCTGAAATAAGTGATAGCTTAAGAAACGGGGAAAATATCTTACCCG    250
                     .||.||.||||||||||..||.||||||||.||..|.|.|||.|||||.|
BL01401___yya    201 CCCTCCAGAAATAAGTGGCAGTTTAAGAAATGGAAAGAGTATTTTACCTG    250

BSNT_06250___    251 GATATCATATGGATAAGGAACATTGGATTTCAATTGTTTTAGAACGGACA    300
                     |.||||||||||||||||||.|||||||.|||||||||||||||||.|.|
BL01401___yya    251 GTTATCATATGGATAAGGAAAATTGGATATCAATTGTTTTAGAACGAATA    300

BSNT_06250___    301 GATCCAGAAGGCGAAATCTATAACTTAATCGAGCAGAGCTTTCATTTAAC    350
                     |||.|||||   |||.|.|||||||||||.|||||.||||||.|||||||
BL01401___yya    301 GATTCAGAA---GAAGTTTATAACTTAATTGAGCAAAGCTTTAATTTAAC    347

BSNT_06250___    351 CAAGTGA    357
                     |||||.|
BL01401___yya    348 CAAGTAA    354


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