Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06250 and BL01401
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:13
# Commandline: needle
# -asequence dna-align/BSNT_06250___yyaQ.1.5803.seq
# -bsequence dna-align/BL01401___yyaQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06250___yyaQ-BL01401___yyaQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06250___yyaQ-BL01401___yyaQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06250___yyaQ
# 2: BL01401___yyaQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 357
# Identity: 296/357 (82.9%)
# Similarity: 296/357 (82.9%)
# Gaps: 3/357 ( 0.8%)
# Score: 1237.0
#
#
#=======================================
BSNT_06250___ 1 ATGTTAACAAGAGAAGATATCTTTAAACACGTCAAAGAAAAATACGGTAC 50
||||||||||||||||||||||||||.||||||||||||||||.|||.||
BL01401___yya 1 ATGTTAACAAGAGAAGATATCTTTAAGCACGTCAAAGAAAAATTCGGGAC 50
BSNT_06250___ 51 ATCGCCTGATTACCCGTGGGTGAAATACCCAAACTATGCTTCTTTGAGAC 100
||||||.||||||||.|.....||||..|||||||||||..||||.||||
BL01401___yya 51 ATCGCCAGATTACCCATTTCAAAAATTTCCAAACTATGCCGCTTTAAGAC 100
BSNT_06250___ 101 ATACATCAAACAAAAAATGGTACGGTCTTATCATGAATGTTCTCCCAGAA 150
||..|.|.|.|.||||||||||.||||||.|.|||||||||||.||.|||
BL01401___yya 101 ATGAAACTACCGAAAAATGGTATGGTCTTGTAATGAATGTTCTTCCGGAA 150
BSNT_06250___ 151 AAATTAGGCTTGGATGGTCATGGCGAAATAGATATTCTAAATCTAAAATG 200
||.||||||||.|||||..|||.|||||||||||||||.|||.|||||||
BL01401___yya 151 AAGTTAGGCTTAGATGGAAATGACGAAATAGATATTCTGAATTTAAAATG 200
BSNT_06250___ 201 TCCCCCTGAAATAAGTGATAGCTTAAGAAACGGGGAAAATATCTTACCCG 250
.||.||.||||||||||..||.||||||||.||..|.|.|||.|||||.|
BL01401___yya 201 CCCTCCAGAAATAAGTGGCAGTTTAAGAAATGGAAAGAGTATTTTACCTG 250
BSNT_06250___ 251 GATATCATATGGATAAGGAACATTGGATTTCAATTGTTTTAGAACGGACA 300
|.||||||||||||||||||.|||||||.|||||||||||||||||.|.|
BL01401___yya 251 GTTATCATATGGATAAGGAAAATTGGATATCAATTGTTTTAGAACGAATA 300
BSNT_06250___ 301 GATCCAGAAGGCGAAATCTATAACTTAATCGAGCAGAGCTTTCATTTAAC 350
|||.||||| |||.|.|||||||||||.|||||.||||||.|||||||
BL01401___yya 301 GATTCAGAA---GAAGTTTATAACTTAATTGAGCAAAGCTTTAATTTAAC 347
BSNT_06250___ 351 CAAGTGA 357
|||||.|
BL01401___yya 348 CAAGTAA 354
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