Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01857 and BL01388

See DNA alignment / Visit BSNT_01857 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:21
# Commandline: needle
#    -asequence pep-align/BSNT_01857___yisY.1.5803.seq
#    -bsequence pep-align/BL01388___yisY.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01857___yisY-BL01388___yisY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01857___yisY-BL01388___yisY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01857___yisY
# 2: BL01388___yisY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     117/270 (43.3%)
# Similarity:   170/270 (63.0%)
# Gaps:          12/270 ( 4.4%)
# Score: 599.5
# 
#
#=======================================

BSNT_01857___      1 MGHYIKTEEHVTLFVEDIG--HGRPIIFLHGWPLNHKMFEYQMNELPKRG     48
                     ||::|:.|..|.|:||||.  .|:.|:|||||||:|..||||.::|.::|
BL01388___yis      1 MGYFIEAEPSVNLYVEDINPQSGKAIVFLHGWPLSHLQFEYQFDDLSRKG     50

BSNT_01857___     49 FRFIGVDLRGYGQSDRPWEGYDYDTMADDVKAVIYTLQLENAILAGFSMG     98
                     :|.||:|.||:|:||:|..||:|:.:|||::||:..|||.|..|||.|.|
BL01388___yis     51 YRCIGIDWRGFGRSDKPATGYNYNRLADDIRAVVEALQLNNFTLAGHSTG    100

BSNT_01857___     99 GAIAIRYMARHEGADIDKLILLSAAAPAFTKRPGYPYGMRKQDIDDMIEL    148
                     ||||:|||:|:.||.:.||:|:.||||.         |..::....:::.
BL01388___yis    101 GAIALRYMSRYRGAGVSKLVLIDAAAPV---------GFTEETAAKLLQQ    141

BSNT_01857___    149 FKTDRPKTLADLGKQFFEKKVSPELRQWFLNLMLEASSYGTIHSGIALRD    198
                     ...||||.:.::...||.:.::......|..|.|:|:.:.|......|||
BL01388___yis    142 ASNDRPKMMREVTDTFFFQYITQPFSDCFFQLGLQAAGWSTKAVIEMLRD    191

BSNT_01857___    199 EDLRKELAAIKVPTLILHGRKDKIAPFDFAKELKRGIKQSELVPFANSGH    248
                     |.|..:...:..|.||:||.:||:.||..||||.|.|:.|.||||..|||
BL01388___yis    192 EKLYDDPEKVAAPALIIHGIQDKVIPFAQAKELSRKIRNSYLVPFQYSGH    241

BSNT_01857___    249 GAFYEEKEKINSLIAQFSNS    268
                     |.|:||::..|.::.||.. 
BL01388___yis    242 GPFWEERKMFNRILTQFIG-    260


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