Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03558 and BL01386
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:33
# Commandline: needle
# -asequence pep-align/BSNT_03558.1.5803.seq
# -bsequence pep-align/BL01386___yqjD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03558-BL01386___yqjD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03558-BL01386___yqjD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03558
# 2: BL01386___yqjD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 510
# Identity: 243/510 (47.6%)
# Similarity: 297/510 (58.2%)
# Gaps: 137/510 (26.9%)
# Score: 1241.5
#
#
#=======================================
BSNT_03558 0 -------------------------------------------------- 0
BL01386___yqj 1 MNMFERVDDLNNSRQKASLGGGQERIDRQKQKGKLTARERIDLLLDEGTF 50
BSNT_03558 0 -------------------------------------------------- 0
BL01386___yqj 51 TELNAFARSRQSGGPLGDGVVTGFGKIDGRPVYLFSQDFTVTGGALGEMH 100
BSNT_03558 1 --------------------------------MVSLDGYGHIFYRNVLYS 18
::||||||||||||||.|
BL01386___yqj 101 AKKIAAVMDLALKNKAPFIGLNDSGGARIQEGVLSLDGYGHIFYRNVLCS 150
BSNT_03558 19 GVIPQISVILGPCAGGAVYSPALTDFIFMAEQTGRMFITGPKVIEKVTGE 68
|:||||||||||||||||||||||||:||:|:||:|||||||||:..|||
BL01386___yqj 151 GIIPQISVILGPCAGGAVYSPALTDFVFMSEKTGQMFITGPKVIKTATGE 200
BSNT_03558 69 QVDAESLGGAGIHNAVSGNAHFSGHTEKEVLTGVRKLLSYLPLNGRTTEP 118
.|.:..||||.|||::||||||||.:::.||..|||||||:..|.....|
BL01386___yqj 201 AVSSGELGGAYIHNSISGNAHFSGDSDEAVLHEVRKLLSYILQNHEEKPP 250
BSNT_03558 119 KPEKEAS----RPLLNRLVPADTTKPYDVRKVIRELADPQTFFELQPFFA 164
...::|. ||.|..::|.|..:||||:::|.|:||..||||:|..||
BL01386___yqj 251 AKARKAKDHEIRPALMTILPEDGQRPYDVKQIIAEIADGGTFFEVQCHFA 300
BSNT_03558 165 KNIVIGFARLGEKAIGIVASQPKHLAGSLTIDAADKAARFIRFCDAFDIP 214
||.||||||:..:...:||:|||:|||||::|||||.||||||||:|.||
BL01386___yqj 301 KNAVIGFARIAGETAAVVANQPKYLAGSLSMDAADKIARFIRFCDSFQIP 350
BSNT_03558 215 LLTVEDVPGFLPGIQQEHNGIIRHGAKLLFAYAEATVPKVTLIIRKAYGG 264
:||:.|.|||||||::||.|:||||||:|:|||||||.|||:|:||||||
BL01386___yqj 351 ILTLVDCPGFLPGIREEHGGVIRHGAKILYAYAEATVSKVTVILRKAYGG 400
BSNT_03558 265 AYVAMNSKAIGADLVFAWPNAEIAVMGPEGAASILYEKEIKASADPQKTK 314
||||:||||:|||.|||||||||||||...||.:|:.|||:.|.||:..:
BL01386___yqj 401 AYVALNSKALGADAVFAWPNAEIAVMGASEAADVLFAKEIERSDDPRAAR 450
BSNT_03558 315 REKTAEYKKQNAGPYKAAACGMVDDIILPEESRGKLIQAFHMLAHKTEER 364
.||..:. .|.:.|:.||..|||||||.|:|:|.||||.|.||..|.|.|
BL01386___yqj 451 EEKIRKC-MQASSPFTAARYGMVDDIIDPKETRKKLIQTFDMLKSKKEIR 499
BSNT_03558 365 PKKKHGNIPL 374
..||||||||
BL01386___yqj 500 LDKKHGNIPL 509
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