Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03263 and BL01367
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:55
# Commandline: needle
# -asequence pep-align/BSNT_03263___ypgR.1.5803.seq
# -bsequence pep-align/BL01367___ypgR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03263___ypgR-BL01367___ypgR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03263___ypgR-BL01367___ypgR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03263___ypgR
# 2: BL01367___ypgR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 378
# Identity: 305/378 (80.7%)
# Similarity: 345/378 (91.3%)
# Gaps: 1/378 ( 0.3%)
# Score: 1603.0
#
#
#=======================================
BSNT_03263___ 1 MKIKSIEPTPSPNTMKVILTEELPAGKSNNYKPEQAEGAPPVIEEILKID 50
||||||||||||||||||||||||.|||||||.:.||||||||:|:|.||
BL01367___ypg 1 MKIKSIEPTPSPNTMKVILTEELPGGKSNNYKKDHAEGAPPVIQEVLNID 50
BSNT_03263___ 51 GVKGVYHVADFLAVERNARYDWKDILPQVRTAFGMESAESGEENRSDQES 100
|||||||||||:|||||||:|||||||:||.||||:.||..|....::||
BL01367___ypg 51 GVKGVYHVADFIAVERNARFDWKDILPKVRAAFGMDEAEEAEGRSEEKES 100
BSNT_03263___ 101 FGEVKVFVQMFSGIPMQVKLTDGEREERFGLPERFQQAILKLRSEASNVV 150
||||||||||||||||||||||||||||||||||||:|||||::.:||||
BL01367___ypg 101 FGEVKVFVQMFSGIPMQVKLTDGEREERFGLPERFQEAILKLKTASSNVV 150
BSNT_03263___ 151 FERAWKEQGVRFGDFDEIGHDVTEELQAAYSDERLKRLTEAAAQGKGEAK 200
.||:|||||||||||.|||.:|||||:|||.:|||::|||:||....|||
BL01367___ypg 151 LERSWKEQGVRFGDFSEIGREVTEELEAAYDEERLRKLTESAASSDAEAK 200
BSNT_03263___ 201 QT-VQRKAYKVTLDMLDDEDWKKRYAHLEQMDPKEEDIPVLQKALDDPKV 249
:| ||||:|:|||:|:|:|||:|||||||||||.|||||||:|||:|||.
BL01367___ypg 201 RTAVQRKSYRVTLEMMDEEDWQKRYAHLEQMDPTEEDIPVLEKALNDPKT 250
BSNT_03263___ 250 SIRRQAVVYLGMIETPDVLPLLYKALEDKAVSVRRTAGDCLSDIGDPQAI 299
||||.|||||||||||.||||||||||||.::|||||||||||||:|:||
BL01367___ypg 251 SIRRLAVVYLGMIETPAVLPLLYKALEDKTITVRRTAGDCLSDIGNPEAI 300
BSNT_03263___ 300 PAMIKSLSDSSKLVRWRAAMFLYEVGDESAIEALRAAEDDPEFEVSLQVK 349
|||||:|.|.||||||||||||||||||||:.||:.||:|||||||||:|
BL01367___ypg 301 PAMIKALKDPSKLVRWRAAMFLYEVGDESALPALKEAENDPEFEVSLQIK 350
BSNT_03263___ 350 MALERIEHGEEAKGSVWKQMTESRKKGE 377
||:||||:||||||||||||||||||..
BL01367___ypg 351 MAIERIEYGEEAKGSVWKQMTESRKKDS 378
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