Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02055 and BL01362

See DNA alignment / Visit BSNT_02055 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:32
# Commandline: needle
#    -asequence pep-align/BSNT_02055___yjfA.1.5803.seq
#    -bsequence pep-align/BL01362.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02055___yjfA-BL01362.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02055___yjfA-BL01362.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02055___yjfA
# 2: BL01362
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 157
# Identity:      57/157 (36.3%)
# Similarity:    76/157 (48.4%)
# Gaps:          45/157 (28.7%)
# Score: 274.5
# 
#
#=======================================

BSNT_02055___      1 MKRLFMKASLVLFAVVFVFAVKGAPAKAETHAYDGKSPYYNDCASTGSTK     50
                                     .:..:|    ..|||:...:...:|       ..
BL01362            1 ----------------MLSQIK----YEETHSLQLRFKRHN-------KG     23

BSNT_02055___     51 KSSNLVNASNQVIGVVELKFSSTCKTAWAKITMNNTLTSGFEANAEITRN    100
                     .|..|::|:|:..|:|.|||||.|||||||:|::..::.|.||||.:.||
BL01362           24 DSQRLIDANNKQFGIVVLKFSSVCKTAWAKMTLDKAVSLGLEANAYLKRN     73

BSNT_02055___    101 TDGKRYNCDSAGGNGKAVAGQKSCYTPMVYDLDPRTSYAFGKYSGPNLNV    150
                     ||||..:|..|||.||.:.||.||||||| |.|||:|||.          
BL01362           74 TDGKELSCSPAGGKGKVLPGQTSCYTPMV-DFDPRSSYAM----------    112

BSNT_02055___    151 WATTGSY    157
                            
BL01362          112 -------    112


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