Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02055 and BL01362

See Amino acid alignment / Visit BSNT_02055 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:32
# Commandline: needle
#    -asequence dna-align/BSNT_02055___yjfA.1.5803.seq
#    -bsequence dna-align/BL01362.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02055___yjfA-BL01362.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02055___yjfA-BL01362.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02055___yjfA
# 2: BL01362
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 497
# Identity:     235/497 (47.3%)
# Similarity:   235/497 (47.3%)
# Gaps:         181/497 (36.4%)
# Score: 614.5
# 
#
#=======================================

BSNT_02055___      1 TTGAAAAGACTGTTTATGAAGGCTTCATTGGTGTTATTCGCAGT-AGTAT     49
                                                        ||.|.|||| || ||
BL01362            1 -----------------------------------ATGCTCAGTCAG-AT     14

BSNT_02055___     50 TTGTTTTTGCCGTCAAAGGTGCACCCGCCAAGGCGGAAACCCATGCCTAC     99
                     |                            |||               ||.
BL01362           15 T----------------------------AAG---------------TAT     21

BSNT_02055___    100 GATG-GAAAAAGCCCTTATTACAATG--ATTGTGCGTCCACCGGCTCTAC    146
                     ||.| ||       ||.||| ||.||  ||||.||.||.|.||||   ||
BL01362           22 GAAGAGA-------CTCATT-CACTGCAATTGCGCTTCAAGCGGC---AC     60

BSNT_02055___    147 AAAAAAATCCTCAAACTTAG--TGA---ATGCCAGCAATCAAGTCA--TC    189
                     ||.|||..|..||..|..||  |||   ||||.|..|||.||  ||  ||
BL01362           61 AACAAAGGCGACAGCCAGAGGCTGATAGATGCAAATAATAAA--CAATTC    108

BSNT_02055___    190 GGAGTAGTCGAGCTTAAATTCAGCAGTACATGTAAAACGGCTTGGGCAAA    239
                     |||.|.||.|.|.|.|||||||||||....||.|||||.||.|||||.||
BL01362          109 GGAATCGTGGTGTTAAAATTCAGCAGCGTCTGCAAAACAGCATGGGCTAA    158

BSNT_02055___    240 AATCACGATGAATAATACATTGACGTCTGGCTTTGAAGCAAATGCGGAGA    289
                     |||.|||.||.|.||..||.||.|.|..|||||.||.||||||||  |.|
BL01362          159 AATGACGCTGGACAAAGCAGTGTCCTTAGGCTTGGAGGCAAATGC--ATA    206

BSNT_02055___    290 TT--ACCCGAAACACGGACGGAAAGAGATATAATTGTGATTCTGCA----    333
                     ||  |...|||||||.||||||||     |.||.||.|   |||||    
BL01362          207 TTTGAAAAGAAACACAGACGGAAA-----AGAACTGAG---CTGCAGCCC    248

BSNT_02055___    334 ----GGCGGCAATGGAAAAGCGGTGGCCGGCCAAAAGTCTTGCTATACAC    379
                         ||.||.||.|||||||.|.|..|.||.||.|..||.||.|||||||
BL01362          249 GGCTGGAGGAAAAGGAAAAGTGCTCCCGGGGCAGACATCCTGTTATACAC    298

BSNT_02055___    380 CGATGGTATATGATTTAGATCCAAGGACTTCTTA--CGCTTTCGGCAAGT    427
                     |||||||   ||||||.|||||..|..||||.||  ||.|.|.|      
BL01362          299 CGATGGT---TGATTTCGATCCGCGTTCTTCATATGCGATGTAG------    339

BSNT_02055___    428 ATTCAGGACCAAACTTAAATGTTTGGGCCACCACAGGCTCTTATTAA    474
                                                                    
BL01362          339 -----------------------------------------------    339


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