Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01813 and BL01349

See DNA alignment / Visit BSNT_01813 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:18
# Commandline: needle
#    -asequence pep-align/BSNT_01813___sbcD.1.5803.seq
#    -bsequence pep-align/BL01349___sbcD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01813___sbcD-BL01349___sbcD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01813___sbcD-BL01349___sbcD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01813___sbcD
# 2: BL01349___sbcD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 393
# Identity:     307/393 (78.1%)
# Similarity:   347/393 (88.3%)
# Gaps:           2/393 ( 0.5%)
# Score: 1605.0
# 
#
#=======================================

BSNT_01813___      1 MRILHTADWHLGKTLEGRSRLSEQADVLDEINTIVKDEQIDAIVMAGDAF     50
                     |||||||||||||||||||||.||.|.|:|:..|||||:|||::||||||
BL01349___sbc      1 MRILHTADWHLGKTLEGRSRLKEQEDFLEELARIVKDEKIDAVIMAGDAF     50

BSNT_01813___     51 DTVNPPALAEQLFYESLSALSDRGKRPIVVIAGNHDNPDRLSAASPLTHE    100
                     ||||||||||||||||||||||:|.||:||||||||||||||||||||.:
BL01349___sbc     51 DTVNPPALAEQLFYESLSALSDKGNRPVVVIAGNHDNPDRLSAASPLTTD    100

BSNT_01813___    101 NGIHLIGYPTTEPIHIEVPSAGELLAVGALAYPSEARLNEVLSDTFDEKL    150
                     :||||||||.|.|:.|||.|:||:|:|.|||||||:|||||||:||||||
BL01349___sbc    101 HGIHLIGYPRTAPVDIEVASSGEILSVAALAYPSESRLNEVLSETFDEKL    150

BSNT_01813___    151 LRDHYDVKIRQAFEHMTSRFRNDAVKIAASHIYVAGGNQTDSERPIEVGG    200
                     |||.||.||:|.|:.|.|:.|.|||:|||||||||||:||||||||||||
BL01349___sbc    151 LRDQYDEKIKQTFQRMCSKARKDAVQIAASHIYVAGGSQTDSERPIEVGG    200

BSNT_01813___    201 AYTVAAESLPADAAYVALGHLHRPQTIKRARTLARYSGSPLAYSFSEAGY    250
                     ||||||||||.:||||||||||||||||||||||||||||||||||||||
BL01349___sbc    201 AYTVAAESLPENAAYVALGHLHRPQTIKRARTLARYSGSPLAYSFSEAGY    250

BSNT_01813___    251 AKSVTIVDAKPGEEATWQEVLLSSGKPLVKWKAANGLSEVYSWLDEDRDQ    300
                     |||||||:|.||:.|:|:||.|:||||||||||..|:|:|||||:|:||:
BL01349___sbc    251 AKSVTIVEAAPGQTASWEEVHLTSGKPLVKWKAEKGMSQVYSWLEEERDK    300

BSNT_01813___    301 NAWIDLEIRVADQLSLEEIHRLRKAHPGFIHIRPVFEERNKDRERIEVKH    350
                     ||||||||.:.||||:|||||||||..|.|||||||||.....|:...::
BL01349___sbc    301 NAWIDLEIHLTDQLSIEEIHRLRKARQGIIHIRPVFEEAASAEEKSRSRN    350

BSNT_01813___    351 VSIEDRFKKFYEKQTGGAVPDEEMVKLFLELASGVEEEDAK--    391
                     |.||:|||.|||:||||||||||.||||||||||.|:|:..  
BL01349___sbc    351 VPIEERFKAFYERQTGGAVPDEETVKLFLELASGSEQEEGDET    393


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