Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01813 and BL01349
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:18
# Commandline: needle
# -asequence dna-align/BSNT_01813___sbcD.1.5803.seq
# -bsequence dna-align/BL01349___sbcD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01813___sbcD-BL01349___sbcD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01813___sbcD-BL01349___sbcD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01813___sbcD
# 2: BL01349___sbcD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1207
# Identity: 885/1207 (73.3%)
# Similarity: 885/1207 (73.3%)
# Gaps: 56/1207 ( 4.6%)
# Score: 3143.0
#
#
#=======================================
BSNT_01813___ 1 TTGCGGATTTTACATACGGCTGACTGGCATCTTGGAAAAACGCTTGAAGG 50
.||||.|||||||||||.||.|||||||||.|.|||||||||||||||||
BL01349___sbc 1 ATGCGAATTTTACATACAGCGGACTGGCATTTGGGAAAAACGCTTGAAGG 50
BSNT_01813___ 51 AAGAAGCAGGCTGAGTGAACAGGCCGATGTGCTGGATGAAATAAATACGA 100
.||||||.|.||||..|||||||..|||.|.||.||.||..|....|.||
BL01349___sbc 51 GAGAAGCCGACTGAAAGAACAGGAGGATTTTCTTGAAGAGCTCGCAAGGA 100
BSNT_01813___ 101 TTGTAAAGGATGAGCAGATCGATGCCATTGTAATGGCGGGGGATGCATTT 150
|.|||||.|||||..|||||||.||..||.|.|||||.||.||.||.|||
BL01349___sbc 101 TCGTAAAAGATGAAAAGATCGACGCTGTTATCATGGCCGGAGACGCTTTT 150
BSNT_01813___ 151 GACACCGTAAACCCGCCAGCTTTAGCCGAGCAGCTGTTTTATGAAAGCCT 200
|||||.||.||||||||.||..|.||.||.|||||.||||||||||||||
BL01349___sbc 151 GACACAGTGAACCCGCCTGCACTGGCTGAACAGCTTTTTTATGAAAGCCT 200
BSNT_01813___ 201 GTCTGCGCTTAGC-GACAGAGGAAAGCGCCCGATCGTCGTCATTGCCGGA 249
.||.|| |||..| ||||.||||||.||.|||.|||||||.||||||||.
BL01349___sbc 201 CTCAGC-CTTGTCTGACAAAGGAAACCGTCCGGTCGTCGTGATTGCCGGC 249
BSNT_01813___ 250 AACCACGATAATCCTGACCGTTTGTCCGCCGCTTCACCGCTGAC-ACATG 298
||.||.||.|||||.|||||..|.|||||.||.||.|||.|.|| ||| |
BL01349___sbc 250 AATCATGACAATCCGGACCGCCTTTCCGCGGCCTCTCCGTTAACGACA-G 298
BSNT_01813___ 299 AAAACGGCATTCATTTAATCGGTTATCCGACAACAGAGCCGATTCATATT 348
|..|||||||.||.||.|||||.||.||||..||.|.||||.||.|.||.
BL01349___sbc 299 ACCACGGCATCCACTTGATCGGGTACCCGAGGACTGCGCCGGTTGACATA 348
BSNT_01813___ 349 GAAGTGCCTTC-AGCAGGAGAGCTTTTGGCGGTTGGAGCGCTGGCGTACC 397
|||||..|||| || .||.|||.|.|||.|.||.|..|||||.||.||.|
BL01349___sbc 349 GAAGTCGCTTCTAG-TGGGGAGATCTTGTCAGTCGCGGCGCTCGCCTATC 397
BSNT_01813___ 398 CATCTGAAGCGCGGTTAAATGAAGTGCTATCCGATACGTTTGATGAAAAG 447
|.||.||..|..|..|.|||||||||||.||.||.||.||||||||||||
BL01349___sbc 398 CTTCCGAGTCCAGACTGAATGAAGTGCTGTCGGAGACATTTGATGAAAAG 447
BSNT_01813___ 448 CTGCTCCGTGATCACTATGATGTGAAAATCAGGCAGGCGTTTGAGCATAT 497
|||||.||.||.||.|||||||.||||||||.||||.|.|||.|||.|||
BL01349___sbc 448 CTGCTGCGCGACCAGTATGATGAGAAAATCAAGCAGACCTTTCAGCGTAT 497
BSNT_01813___ 498 G----ACAAGCCGGTTCCGGAACGATGCAGTGAAGATTGCCGCCAGCCAT 543
| .||||.|| .|.||.||.||.|||.|||||||.||.||||||
BL01349___sbc 498 GTGCAGCAAGGCG----AGAAAGGACGCGGTGCAGATTGCGGCAAGCCAT 543
BSNT_01813___ 544 ATTTATGTGGCAGGCGGAAACCAAACCGATTCAGAGCGGCCGATTGAAGT 593
||.||||||||.|||||.|.|||.||.|||||.|||||||||||.|||||
BL01349___sbc 544 ATCTATGTGGCCGGCGGCAGCCAGACGGATTCCGAGCGGCCGATCGAAGT 593
BSNT_01813___ 594 CGGCGGTGCATACACGGTGGCTGCTGAAAGCCTGCCGGCAGATGCCGCTT 643
|||.||.|||||.|||||.|||||.|||||||||||||.|.|.|||||.|
BL01349___sbc 594 CGGAGGCGCATATACGGTCGCTGCGGAAAGCCTGCCGGAAAACGCCGCAT 643
BSNT_01813___ 644 ACGTTGCGCTCGGCCATTTGCATCGCCCGCAAACGATCAAGCGGGCGCGG 693
|.||.||||||||.|||.|.|||||||||||.||||||||..||||.||.
BL01349___sbc 644 ATGTGGCGCTCGGGCATCTTCATCGCCCGCAGACGATCAAAAGGGCCCGC 693
BSNT_01813___ 694 ACGCTTGCGCGTTATTCAGGATCTCCGCTCGCCTACAGCTTTTCTGAAGC 743
||||||||..|.||||||||.||.|||||.||||||||||||||.|||||
BL01349___sbc 694 ACGCTTGCCAGATATTCAGGCTCACCGCTTGCCTACAGCTTTTCCGAAGC 743
BSNT_01813___ 744 GGGCTACGCTAAATCAGTGACGATTGTGGA---CGCAAAGCCTGGGGAAG 790
|||.|||||.||||||||.||.|||||.|| |||| ||.||..||.
BL01349___sbc 744 GGGATACGCAAAATCAGTCACCATTGTCGAAGCCGCA---CCCGGTCAAA 790
BSNT_01813___ 791 AGGCCACTTGGCAAGAGGTGTTATTATCAAGCGGCAAGCCACTTGTGAAG 840
.|||..|.|||.|||||||....||..|.||.||.||.||.||.||.||.
BL01349___sbc 791 CGGCATCATGGGAAGAGGTCCATTTGACGAGTGGAAAACCGCTCGTCAAA 840
BSNT_01813___ 841 TGGAAAGCGGCAAATGGATTGAGTG----AGGTGTACAGCTGGCTGGATG 886
|||||.||||.|||.|| || || |.|||||||||||||||||.|
BL01349___sbc 841 TGGAAGGCGGAAAAAGG---GA-TGTCCCAAGTGTACAGCTGGCTGGAGG 886
BSNT_01813___ 887 AAGACAGAGATCAGAATGCTTGGATTGACCTGGAAATCCGTGTCGCGGAC 936
||||..|.|||.|.||.||.|||||.||.||.|||||||.|.|..|.|||
BL01349___sbc 887 AAGAGCGGGATAAAAACGCGTGGATCGATCTTGAAATCCATCTGACAGAC 936
BSNT_01813___ 937 CAGCTGTCACTTGAAGAGATTCACAGGCTGCGGAAGGCGCACCCGGGCTT 986
||||||||..||||||||||||||.|..||.|.||.||||..|..|||.|
BL01349___sbc 937 CAGCTGTCGATTGAAGAGATTCACCGATTGAGAAAAGCGCGTCAAGGCAT 986
BSNT_01813___ 987 TATCCATATCAGGCCGGTTTTTGAAGAA----------CGGAACA-AAGA 1025
.||||||||..|.|||||||||||.||| |.|||.| |||.
BL01349___sbc 987 CATCCATATACGTCCGGTTTTTGAGGAAGCCGCATCGGCTGAAGAGAAGT 1036
BSNT_01813___ 1026 CCGGGAACGGATCGAGGTTAAACATGTCTCAATCGAGGACCGCTTTAAGA 1075
||.|| ||.|| |||| ||..|.||.||.||.||.|||||..
BL01349___sbc 1037 CCCGG------TCCAG---AAAC--GTTCCGATTGAAGAACGGTTTAAAG 1075
BSNT_01813___ 1076 AATTTTATGAAAAACAAACTGGCGGTGCGGTGCCGGATGAAGAAATGGTG 1125
..||||||||||.||||||.|||||.|||||.||.|||||.||||..||.
BL01349___sbc 1076 CGTTTTATGAAAGACAAACCGGCGGAGCGGTTCCCGATGAGGAAACCGTC 1125
BSNT_01813___ 1126 AAGCTGTTTTTAGAGCTTGCATCAGG--CG----TTGAAGAGGAGGATGC 1169
|||||||||.|.||.||.||.||||| || ..|||||||.|||||.
BL01349___sbc 1126 AAGCTGTTTCTGGAACTCGCCTCAGGATCGGAACAGGAAGAGGGGGATGA 1175
BSNT_01813___ 1170 GAAATGA 1176
.|.||||
BL01349___sbc 1176 AACATGA 1182
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