Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01844 and BL01341

See DNA alignment / Visit BSNT_01844 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:21
# Commandline: needle
#    -asequence pep-align/BSNT_01844___yisR.1.5803.seq
#    -bsequence pep-align/BL01341___yisR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01844___yisR-BL01341___yisR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01844___yisR-BL01341___yisR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01844___yisR
# 2: BL01341___yisR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 287
# Identity:     176/287 (61.3%)
# Similarity:   223/287 (77.7%)
# Gaps:           0/287 ( 0.0%)
# Score: 984.0
# 
#
#=======================================

BSNT_01844___      1 MPRILFTVPPFPVFIAAGEGVFKKGETHVKRVFSVFDLIYVKQGTLYITE     50
                     |..|:||:||.||.|..|||:||:||.||:|.:|||||:||.||.|::||
BL01341___yis      1 MEHIIFTIPPLPVLITGGEGLFKRGEKHVRREYSVFDLLYVIQGELFLTE     50

BSNT_01844___     51 NETSFSVEGGEYILLSPGLEHYGTKGSDEATSYYWLHFDEHRYEFTAKGG    100
                     :.....:..||||:|.|||||||.:|..:.|.|:||||.|..|.|..:||
BL01341___yis     51 DGEPHQIREGEYIILIPGLEHYGHRGCQDDTRYFWLHFQEPSYGFAQQGG    100

BSNT_01844___    101 SNWSELQQEKGSFEEPARYGLALPRKGKVQRPQFMAQQFEKLIDYSAENS    150
                     .||:||:..||:||.|..|.|.:|||||:.:..|:.|||.:|||.||:||
BL01341___yis    101 ENWTELKLRKGTFETPTLYHLKIPRKGKIDQKAFIEQQFRRLIDDSAQNS    150

BSNT_01844___    151 DLPLRKQILFAELMLHLQKEAFQIPSAKERVAWEAARYLQEHYKEKTTIK    200
                     |||||:|:||.||::|||||||.||||.||||.||..|:..|||||.:::
BL01341___yis    151 DLPLRRQLLFEELLIHLQKEAFHIPSASERVASEAQHYIDRHYKEKLSME    200

BSNT_01844___    201 DLSLALHYHQDYVSRCMQQVLGVTPAQYTNRVRMTEAKRLLSSTNDKMGV    250
                     .||.||||||||::||||:|.|:||.||.|:.::.|||||||||||||..
BL01341___yis    201 QLSAALHYHQDYITRCMQKVFGITPGQYANKAKVFEAKRLLSSTNDKMSS    250

BSNT_01844___    251 IAETVGMEDPTYFSKLFKQIEGISPIEYRKIVSRKVQ    287
                     |||.||::|||||||||||||||||:||||::.|.::
BL01341___yis    251 IAEQVGIDDPTYFSKLFKQIEGISPVEYRKMMKRNIE    287


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