Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03093 and BL01340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:46
# Commandline: needle
# -asequence pep-align/BSNT_03093___yokL.1.5803.seq
# -bsequence pep-align/BL01340.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03093___yokL-BL01340.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03093___yokL-BL01340.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03093___yokL
# 2: BL01340
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity: 46/200 (23.0%)
# Similarity: 90/200 (45.0%)
# Gaps: 38/200 (19.0%)
# Score: 165.0
#
#
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BSNT_03093___ 1 MAVSYWTGENLILRAIQPEDI-----VIFDSLDDEILRNMDSLHFPRSAN 45
::...||.:.||.|..:|: :|:.:.:.| .:..|:.:||....
BL01340 1 --MASINGEKVKLRTITMDDLPGLWRMIYGTKNPE-WKKWDAPYFPLQPE 47
BSNT_03093___ 46 NMREWVEE---QLEKDEFRFIAVDSDNNIVGIIETFDCDRKNGTFGYY-- 90
..:.:::. .|::...|::|::....: .||..||
BL01340 48 PFQYFIDSFVPALKEKPPRYLAIEIGGEL------------KGTVSYYWE 85
BSNT_03093___ 91 ----------LAVFEP-YRGKGFAKEMILMVLRFFFLELAYQKVNTTVYS 129
:.:::| :...|:..|.:.:.:.|.|..:...::..|.:|
BL01340 86 SRPTRWLECGIGIYDPRFWNGGYGTEAVELWIGFLFENVDVPRIGMTTWS 135
BSNT_03093___ 130 FNNPSIRLHEKLGFMKEGQLRKIIFTKGAYYDGFCFGMTREEFEL-NHG- 177
.|...:|..||.||..||::||:.:..|.|||...:|:.|||:|| ..|
BL01340 136 GNRRMMRCAEKAGFKMEGRIRKVRYYDGVYYDSIRYGILREEWELICRGS 185
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