Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01845 and BL01339
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:21
# Commandline: needle
# -asequence pep-align/BSNT_01845___degA.1.5803.seq
# -bsequence pep-align/BL01339___degA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01845___degA-BL01339___degA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01845___degA-BL01339___degA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01845___degA
# 2: BL01339___degA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 347
# Identity: 230/347 (66.3%)
# Similarity: 274/347 (79.0%)
# Gaps: 10/347 ( 2.9%)
# Score: 1184.0
#
#
#=======================================
BSNT_01845___ 1 MKTTIYDVAKAAGVSITTVSRVINNTGRISDKTRQKVMNVMNEMAYTPNV 50
||.||||||:||||||:|||||||||||||..|||:|..||.|:.|.|||
BL01339___deg 1 MKKTIYDVAEAAGVSISTVSRVINNTGRISRSTRQRVHAVMKELDYQPNV 50
BSNT_01845___ 51 HAAALTGKRTNMIALVAPDISNPFYGELAKSIEERADELGFQMLICSTDY 100
||:||||||||:|.|:.|||:|||:||||||:||||.||||.:::||||.
BL01339___deg 51 HASALTGKRTNIIGLLTPDIANPFFGELAKSVEERAGELGFSIMMCSTDR 100
BSNT_01845___ 101 DPKKETKYFSVLKQKKVDGIIFATGIESHDSMSALEEIASEHIPIAMISQ 150
||||||.||||||||.|||||||||||:.::|.|||:||.|.||:.||||
BL01339___deg 101 DPKKETTYFSVLKQKSVDGIIFATGIENQETMDALEDIAKEGIPLVMISQ 150
BSNT_01845___ 151 DKPLLPMDIVVIDDVRGGYVAAKHLLSLGHTNIACIIGDGSTTGEKNRIK 200
|:.|:|||:|||||..|||:|.:||:||||..||||.|||||||||:|:|
BL01339___deg 151 DRALVPMDVVVIDDFMGGYLATRHLISLGHKTIACIAGDGSTTGEKDRLK 200
BSNT_01845___ 201 GFRQAMEEAGVPIDESLIIQTRFYLESGKEEAGKLLDRNAPTAIFAFNDV 250
||::||:|||:..||:||..:.|.||.||:.|.::...|.|||:||.|||
BL01339___deg 201 GFKKAMDEAGIKADETLIAGSGFSLECGKKAAAQIFKSNIPTAVFAMNDV 250
BSNT_01845___ 251 LACAAIQVARIRGIKVPDDLSIIGFDNTILAEMAAPPLTTVAQPIKEMGR 300
|||..||.||..|:.||.|||:||||||.||||..||||||:|||:||||
BL01339___deg 251 LACGVIQTAREWGLHVPTDLSVIGFDNTFLAEMTDPPLTTVSQPIEEMGR 300
BSNT_01845___ 301 SVIELLAEAIEGKRKAKQKIVLPPELVVRHSTSPLNT---------- 337
...|||||.|.||:.:|.||:|.||||||.||:|...
BL01339___deg 301 RAAELLAEEISGKKSSKSKIILTPELVVRQSTAPPFKKEAHAEKSGF 347
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