Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01853 and BL01337
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:21
# Commandline: needle
# -asequence pep-align/BSNT_01853___yisV.1.5803.seq
# -bsequence pep-align/BL01337___yisV.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01853___yisV-BL01337___yisV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01853___yisV-BL01337___yisV.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01853___yisV
# 2: BL01337___yisV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 482
# Identity: 133/482 (27.6%)
# Similarity: 164/482 (34.0%)
# Gaps: 271/482 (56.2%)
# Score: 695.0
#
#
#=======================================
BSNT_01853___ 1 MSQWQPSRKSDIPLHRQIEQYMKDKILHGEWAVGTKIPSQRTLADMFQVN 50
BL01337___yis 0 -------------------------------------------------- 0
BSNT_01853___ 51 RSTVTAAIDELTSQGLLEGRRGGGTKVVNSTWSVLAAEPPLDWSDYVRSG 100
BL01337___yis 0 -------------------------------------------------- 0
BSNT_01853___ 101 IHRANSSIIQAINQNEPRADIIRLGTGELSPDLVPADTIGRMFQQINPGA 150
BL01337___yis 0 -------------------------------------------------- 0
BSNT_01853___ 151 LSLGYEQPKGNRQLREAVADHLKGKKIHVSPSAILIVSGALQALQLISIG 200
BL01337___yis 0 -------------------------------------------------- 0
BSNT_01853___ 201 LLKRDSVILTEKPSYLQSLHVFQSAGMRLRGLPMDDEGVKAGLVSSNRKQ 250
BL01337___yis 0 -------------------------------------------------- 0
BSNT_01853___ 251 YGGQLLYTIPSFHNPTGTVMSEQRRKEIISLSKKEQLPIIEDDAYGDLWF 300
|||.|::|:|.:||:..||:|||||||||..
BL01337___yis 1 -------------------MSEDRKRELIQISKQLSLPVIEDDAYGDLQL 31
BSNT_01853___ 301 EEKPPQPLKAMDHEGNILYLGTFSKTVSPGLRIGWLAGPEPVIERLADIK 350
:..|..||||||.||:|||:||.||||||||||||:||||||||||||||
BL01337___yis 32 DGPPSSPLKAMDREGSILYVGTLSKTVSPGLRIGWVAGPEPVIERLADIK 81
BSNT_01853___ 351 MQTDYGSSGLSQWAAAEWLSQGYYEEHLTWVRRKLKERRDAAVHFLERYA 400
||||||||.|||||||:|||.|.|:|:|:.::.:|::|||.|:..||.|.
BL01337___yis 82 MQTDYGSSSLSQWAAAKWLSSGLYDENLSRIKVELRQRRDEALRCLETYC 131
BSNT_01853___ 401 GDIATWRIPAGGFYIWVTFHKNLPVSRFFYGLLKRQVLVNPGYIYDGEDR 450
..||.|..|:|||||||||.|.|.:|..|...|::.:|:|||.:||.|.:
BL01337___yis 132 RGIARWEKPSGGFYIWVTFLKPLSLSALFEQALQKNILINPGTLYDKEAK 181
BSNT_01853___ 451 NSIRLSYSYASLGDLETGIKAAAETARRLMMS 482
.|||||||||||.:|..||:..||.|.:||
BL01337___yis 182 YSIRLSYSYASLTELRYGIQTIAELAGKLM-- 211
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