Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01807 and BL01320

See DNA alignment / Visit BSNT_01807 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:17
# Commandline: needle
#    -asequence pep-align/BSNT_01807___yhjR.1.5803.seq
#    -bsequence pep-align/BL01320___yhrR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01807___yhjR-BL01320___yhrR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01807___yhjR-BL01320___yhrR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01807___yhjR
# 2: BL01320___yhrR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 148
# Identity:      72/148 (48.6%)
# Similarity:    97/148 (65.5%)
# Gaps:           5/148 ( 3.4%)
# Score: 350.0
# 
#
#=======================================

BSNT_01807___      1 MHY--SYYP-YPVPYREDPVLIRNLQKAINGEFSAIQCYRKLAELAHSDE     47
                     |.|  .|:| ||.  |::..||::|:||:|||.||:.||:|:|:.|...|
BL01320___yhr      1 MWYVQPYHPAYPA--RQNNRLIKDLEKAVNGEHSAVVCYQKIAQKAPDAE     48

BSNT_01807___     48 VRKQIEEIRRDEIRHLREFSTLYGSITGKHIMPKQTEECPDNFTRGLDAA     97
                     .::||.|||:|||||...|...|.|:.|:......||.||:.:...|::|
BL01320___yhr     49 AKQQILEIRQDEIRHFNAFLAFYTSLAGRKPDISITEPCPEQYWNALESA     98

BSNT_01807___     98 FKDEQETVDFYLRAAEETSNLKAKGVFTRAARDEQNHAVWFLYYLMER    145
                     .|||||||||||..|:...:...:..|.|||.|||||||||||:|.:|
BL01320___yhr     99 LKDEQETVDFYLDIADYVKDRAIRDAFKRAAADEQNHAVWFLYFLSKR    146


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