Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01823 and BL01319
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:19
# Commandline: needle
# -asequence pep-align/BSNT_01823___gerPC.1.5803.seq
# -bsequence pep-align/BL01319___gerPC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01823___gerPC-BL01319___gerPC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01823___gerPC-BL01319___gerPC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01823___gerPC
# 2: BL01319___gerPC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 205
# Identity: 122/205 (59.5%)
# Similarity: 158/205 (77.1%)
# Gaps: 4/205 ( 2.0%)
# Score: 660.0
#
#
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BSNT_01823___ 1 MYDQSVSSYLQNLNSFVQQQAIHIQQLERQLKEIQTEMNTMKQRPATTIE 50
...|..||...::||||..||:||.|:..:.:|:|.:|:.|.|.|:
BL01319___ger 1 ----MKQSNPQNWYVYLQQQAAQIQRLESQIAVLHSELNQLKENPGTRID 46
BSNT_01823___ 51 RVEYKFDQLKIERLDGTLNIGLNPTDPNSVQNFEVSQSTPQIGMMQQEES 100
|:||||||||||||||||||||||.||::|:|||:||..|.|||:|||..
BL01319___ger 47 RIEYKFDQLKIERLDGTLNIGLNPADPDNVENFEISQQPPGIGMLQQELD 96
BSNT_01823___ 101 AQLMQQIRQNVDMYLTEEIPDILEQLENQYDSRLDDTNRHHVIEDIRKQM 150
:|||||.||.||.||.||.|.:|||||::|||:||||||||:|||||||:
BL01319___ger 97 SQLMQQTRQLVDAYLNEETPRLLEQLEDRYDSKLDDTNRHHIIEDIRKQI 146
BSNT_01823___ 151 DSRIHYYMSHIKKEEHTPPAQYAEHIAEHVKRDVIRAVEHFLEHIPSEMK 200
||||.||:.|:|.:.:..|.::||.:|::||||:.||:||||:.||.|||
BL01319___ger 147 DSRIRYYVKHVKPDGNIQPREHAERLADYVKRDIARAIEHFLKSIPDEMK 196
BSNT_01823___ 201 GDEQA 205
|:|..
BL01319___ger 197 GNENE 201
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