Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01823 and BL01319
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:19
# Commandline: needle
# -asequence dna-align/BSNT_01823___gerPC.1.5803.seq
# -bsequence dna-align/BL01319___gerPC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01823___gerPC-BL01319___gerPC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01823___gerPC-BL01319___gerPC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01823___gerPC
# 2: BL01319___gerPC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 673
# Identity: 419/673 (62.3%)
# Similarity: 419/673 (62.3%)
# Gaps: 122/673 (18.1%)
# Score: 1280.0
#
#
#=======================================
BSNT_01823___ 1 ATGTATG------ATCAATCTGTTTCCTCTTACCTGCAAAACT------T 38
||| |.|||| |..||.|||| |
BL01319___ger 1 ----ATGAAACAAAGCAAT--------------CCACAGAACTGGTATGT 32
BSNT_01823___ 39 GAATTCCTTCGTTCAGCAGCAGGCGATTCACATTCAGCAGCTCGAACGTC 88
|.||| |.|||||||||||....||.||.|||..|||||||.|||
BL01319___ger 33 GTATT------TGCAGCAGCAGGCTGCGCAAATCCAGAGGCTCGAAAGTC 76
BSNT_01823___ 89 AGCTGAAAGAGATTCAAACTGAAATGAATAC---GATGAAACAGCGG--- 132
||||| .|.|.|.||.||.| |.||||.||||.|
BL01319___ger 77 ---------AGATT---GCCGTATTGCATTCGGAGTTGAACCAGCTGAAA 114
BSNT_01823___ 133 -------CCGGCCACTACC---ATTGAGCGTGTGGAGTATAAATTTGATC 172
||||| ||| ||.||.||..|.||.||.||||||||||
BL01319___ger 115 GAAAATCCCGGC----ACCCGGATCGACCGGATCGAATACAAATTTGATC 160
BSNT_01823___ 173 AGCTGAAAATCGAAAGGCTCGACGGGACTTTGAATATCGGCTTAAATCCT 222
|.||.|||||.|||.|..|.|||||.||..|.||||||||..|.||||||
BL01319___ger 161 AACTAAAAATTGAACGCTTGGACGGAACGCTAAATATCGGACTCAATCCT 210
BSNT_01823___ 223 ACTGACCCGAACAGCGTCCAAAACTTTGAAGTCAGCCAGTCGACA----C 268
.|.||||||.|.|..|||.|||||||||||.||||||| ||| |
BL01319___ger 211 GCGGACCCGGATAATGTCGAAAACTTTGAAATCAGCCA----ACAGCCGC 256
BSNT_01823___ 269 CGCAAATCGGGATGATGCAGCAGGA---AGAGAGCGCTCAGCTCATGCAG 315
||...|||||.|||.|.|||||||| .||.||| |||||.||||||
BL01319___ger 257 CGGGTATCGGAATGCTTCAGCAGGAGCTTGACAGC---CAGCTGATGCAG 303
BSNT_01823___ 316 CAGATCCGCCAGAATGTCGACATG--TACTTAACCGAGGAAATCCCAGAT 363
||.|...|.|||..||||| ||| ||.||||.|||.||.|.|||...|
BL01319___ger 304 CAAACGAGACAGCTTGTCG--ATGCCTATTTAAACGAAGAGACCCCTCGT 351
BSNT_01823___ 364 ATTTTGGAACAGCTTGAAAACCAATATGACAGCAGACTTGACGATACAAA 413
.|..||||||||||||||.|||..||||||||||.|||.|||||||||||
BL01319___ger 352 TTGCTGGAACAGCTTGAAGACCGGTATGACAGCAAACTGGACGATACAAA 401
BSNT_01823___ 414 CAGACATCATGTTATTGAAGACATCAGAAAACAAATGGACAGCCGAATCC 463
|.|.||.||..||||.||||||||||||||.|||||.||||||||.||||
BL01319___ger 402 CCGCCACCACATTATCGAAGACATCAGAAAGCAAATCGACAGCCGTATCC 451
BSNT_01823___ 464 ATTATTATATGTCCCATATCAAAAAAG--AAG---------AACATACA- 501
..|| |.|..|||||.|.| ||| |||||.||
BL01319___ger 452 GCTA---------CTACGTCAAACATGTAAAGCCTGACGGAAACATCCAG 492
BSNT_01823___ 502 --CCGCCTGCACAATATGCAGAACATATCGCTGAGCATGTGAAGCGTGAT 549
||||..|| |||||||||...|.||.||..||||.||.||.|||
BL01319___ger 493 CCCCGCGAGC-----ATGCAGAACGGCTGGCCGACTATGTCAAACGAGAT 537
BSNT_01823___ 550 GTCATCCGCGCTGTAGAACACTTTCTGGAGCATAT---TCCATCA-GAAA 595
.||...||.||..|.||.|||||||| ||.|| |.|.|.| ||||
BL01319___ger 538 ATCGCACGGGCAATCGAGCACTTTCT----CAAATCAATACCTGACGAAA 583
BSNT_01823___ 596 TGAAAGGAGATGAGCAAGCATGA 618
||||||||.||||..|.|.||||
BL01319___ger 584 TGAAAGGAAATGAAAACGAATGA 606
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