Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01832 and BL01316

See DNA alignment / Visit BSNT_01832 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:20
# Commandline: needle
#    -asequence pep-align/BSNT_01832___yisJ.1.5803.seq
#    -bsequence pep-align/BL01316___cotH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01832___yisJ-BL01316___cotH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01832___yisJ-BL01316___cotH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01832___yisJ
# 2: BL01316___cotH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 367
# Identity:     124/367 (33.8%)
# Similarity:   169/367 (46.0%)
# Gaps:          70/367 (19.1%)
# Score: 455.0
# 
#
#=======================================

BSNT_01832___      1 ------------MERVHLFFHREQLKRKGTAKGLFVTDRSVSPILLTQRD     38
                                 :...||...::.:.......|:.:|..:.:|:.::.|.
BL01316___cot      1 MSATALPAFRLHIHPKHLLELKKDVWSDEAVPGMLLTGSAKTPVAVSYRG     50

BSNT_01832___     39 ----RAEKASYEISWEKSLLGERTLF-LNAEQDDPSLMRRRLAYCFFDQI     83
                         :..|.||.|.:..:  .|:..| ||||..|||.:|.||::.||:||
BL01316___cot     51 AHTRKLTKKSYFIQYPDN--KEKAAFHLNAEYHDPSFIRNRLSFHFFEQI     98

BSNT_01832___     84 GVPAPAASYSFLTINGQPEGIYLNI---------KNHQPAGKRSYGVKTA    124
                     ||.|||||:.||.||.:.|||||.|         :.:...|...|.|...
BL01316___cot     99 GVLAPAASHVFLYINEKKEGIYLKIESVDDHFLKRRNLERGAIYYAVDDD    148

BSNT_01832___    125 DPRVPLSLFN-----------------NDFSAFLHEFFILIRTAGDDELA    157
                     .....||.||                 :....:||||...|.||.||...
BL01316___cot    149 ANFSLLSSFNKKAKQNLMQGYERKTGSSRHDDYLHEFIYFINTAKDDIFE    198

BSNT_01832___    158 ERIKLYLDVKLFFLWLIGNACTN--QGFYYTFCLNESGRLYVSPMETRSL    205
                     :.||.|||||.:.|||||..||.  .||.:.:.|..:||       |::.
BL01316___cot    199 KEIKRYLDVKQYLLWLIGAVCTQNFDGFVHNYALYLNGR-------TKTF    241

BSNT_01832___    206 AVQEW--------------YEEDPLLTKG-KTLSSRLLSIPAFRSQYHTL    240
                     .:..|              .|.:.:..|| .|||:|||.||||:|||..|
BL01316___cot    242 QIIPWDYDATWGRNIHGEEMEHNRIPAKGYNTLSARLLDIPAFQSQYFNL    291

BSNT_01832___    241 MKNVLKRSFTIERLSPLINEWHLDICQSAADDPFIKKSPFQIEKEQTNIL    290
                     |||||.|.|||.|||.....||..|......||:...:..::|.||..|.
BL01316___cot    292 MKNVLHRQFTISRLSRYAVNWHETIAPFLEHDPYTTVTYSRLEDEQKQIF    341

BSNT_01832___    291 REIEERQDFLQAHLARL    307
                     ..|::|:.||...|:| 
BL01316___cot    342 HFIDQRKRFLLFELSR-    357


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