Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01865 and BL01305

See DNA alignment / Visit BSNT_01865 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:22
# Commandline: needle
#    -asequence pep-align/BSNT_01865___yitS.1.5803.seq
#    -bsequence pep-align/BL01305___yitS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01865___yitS-BL01305___yitS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01865___yitS-BL01305___yitS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01865___yitS
# 2: BL01305___yitS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     194/286 (67.8%)
# Similarity:   231/286 (80.8%)
# Gaps:           3/286 ( 1.0%)
# Score: 997.0
# 
#
#=======================================

BSNT_01865___      1 MTVHLIADSATDLPRSYFEEKGIGFIPLRVSLGDKEFEDAVTIHADQIFE     50
                     |.|||:||||.|||:|:::|..|.||||||.|.:||::|.:||....::|
BL01305___yit      1 MNVHLLADSAADLPKSFYDEHRISFIPLRVLLDEKEYDDLLTIQPLDVYE     50

BSNT_01865___     51 AMQNGETPKTSQASPHTIKNVFLQYAETGDPALYIAFSSGLSGTYQTAVM    100
                     ||:.|:.|||||.|....||.|.:.|....|||||||||.||||||||||
BL01305___yit     51 AMREGKAPKTSQPSLMLFKNAFSELANENKPALYIAFSSELSGTYQTAVM    100

BSNT_01865___    101 IANEVKEEFPDFDLRVIDSKCASLGYGLAVQHVADLCINGNTIQEIETSV    150
                     .||||||||||||||:||||||||||||||:|...|..|||||||||:||
BL01305___yit    101 AANEVKEEFPDFDLRIIDSKCASLGYGLAVKHALKLATNGNTIQEIESSV    150

BSNT_01865___    151 KNFCSQLEHIFTVDDLTYLARGGRISKTSAFVGGLLNIKPLLQMEDGKLV    200
                     |:||..|||||||||||||||||||||.||||||||||||||.::|||||
BL01305___yit    151 KDFCEHLEHIFTVDDLTYLARGGRISKASAFVGGLLNIKPLLHVDDGKLV    200

BSNT_01865___    201 PLEKIRGQKKLFKRIIELMKERGDDLSNQTVGISYAANKEKATDMKHLIE    250
                     |||||||:|||.:|:|||||||..|||.||||||:..::|.|.::|.:||
BL01305___yit    201 PLEKIRGKKKLLRRMIELMKERSVDLSGQTVGISHGDDEETAEEVKRMIE    250

BSNT_01865___    251 EAFKPKEIIMHPISSAIGSHAGPGTLAIFFLRK---    283
                     ..|:|:||:::.|.||:|:||||||||:||..|   
BL01305___yit    251 AEFQPEEIVVNMIGSAVGAHAGPGTLAVFFPGKDKR    286


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