Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02619 and BL01291

See DNA alignment / Visit BSNT_02619 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:18
# Commandline: needle
#    -asequence pep-align/BSNT_02619___trmD.1.5803.seq
#    -bsequence pep-align/BL01291___trmD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02619___trmD-BL01291___trmD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02619___trmD-BL01291___trmD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02619___trmD
# 2: BL01291___trmD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity:     209/243 (86.0%)
# Similarity:   231/243 (95.1%)
# Gaps:           0/243 ( 0.0%)
# Score: 1138.0
# 
#
#=======================================

BSNT_02619___      1 MKIDFLTLFPEMFEGVLGSSILQKAQEKDAVQFQVVNFREYSDNKHNTVD     50
                     ||||||||||||||||||||||||||:||||:|:|||||.||||||.|||
BL01291___trm      1 MKIDFLTLFPEMFEGVLGSSILQKAQDKDAVRFRVVNFRAYSDNKHQTVD     50

BSNT_02619___     51 DYPYGGGAGMVLKPQPVFDAVEDLTSKAAAAPRIILVCPQGERFTQKKAE    100
                     ||||||||||||||||||||||.||::|..:||||||||||||:||:|||
BL01291___trm     51 DYPYGGGAGMVLKPQPVFDAVEKLTAEAGGSPRIILVCPQGERYTQQKAE    100

BSNT_02619___    101 QLAKEEHLLFICGHYEGYDERIREHLVTDEISIGDFVLTGGELPAMMIAD    150
                     :||:||||:|||||||||||||||||.|||||||||||||||||||||||
BL01291___trm    101 ELAREEHLMFICGHYEGYDERIREHLSTDEISIGDFVLTGGELPAMMIAD    150

BSNT_02619___    151 SVVRLLPGVLGKEASHIEDSFSTGLLEHPHYTRPADYKGLKVPETLLSGN    200
                     |||||||||||||.||:||||||||||||||||||||||||||:.|.|||
BL01291___trm    151 SVVRLLPGVLGKEESHLEDSFSTGLLEHPHYTRPADYKGLKVPDVLTSGN    200

BSNT_02619___    201 HAKIEEWRNKESIRRTYLRRPDLLKDYPLTEQQRKWISEWEKE    243
                     ||||:|||.|||:|||:|||||||::|||:|::|||||||:..
BL01291___trm    201 HAKIKEWRRKESLRRTFLRRPDLLENYPLSEEERKWISEWKNR    243


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