Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02623 and BL01289

See DNA alignment / Visit BSNT_02623 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:18
# Commandline: needle
#    -asequence pep-align/BSNT_02623___rbgA.1.5803.seq
#    -bsequence pep-align/BL01289___rbgA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02623___rbgA-BL01289___rbgA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02623___rbgA-BL01289___rbgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02623___rbgA
# 2: BL01289___rbgA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 283
# Identity:     248/283 (87.6%)
# Similarity:   270/283 (95.4%)
# Gaps:           1/283 ( 0.4%)
# Score: 1291.0
# 
#
#=======================================

BSNT_02623___      1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKN     50
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BL01289___rbg      1 MVIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKN     50

BSNT_02623___     51 KPRIMLLNKADKADAAVTQRWKEHFEKQGIRSLSINSVNGQGLNQIVPAS    100
                     ||||||||||||||::||:.||:||||.||.:|:||||||||||||:|||
BL01289___rbg     51 KPRIMLLNKADKADSSVTKAWKQHFEKDGIPTLAINSVNGQGLNQILPAS    100

BSNT_02623___    101 KEILQEKFDRMRAKGVKPRAIRALIIGIPNVGKSTLINRLAKKNIAKTGD    150
                     ||:|:||||:|:|||||||||||||:||||||||||||||||||||||||
BL01289___rbg    101 KELLKEKFDKMKAKGVKPRAIRALIVGIPNVGKSTLINRLAKKNIAKTGD    150

BSNT_02623___    151 RPGITTSQQWVKVGKELELLDTPGILWPKFEDELVGLRLAVTGAIKDSII    200
                     |||:||:|||||||||||||||||||||||||||||||||.|||||||||
BL01289___rbg    151 RPGVTTAQQWVKVGKELELLDTPGILWPKFEDELVGLRLAATGAIKDSII    200

BSNT_02623___    201 NLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIGEKRGCLMS    250
                     |||||||:|||||||:||||||:||.|:||||:||.|||.||:||||||:
BL01289___rbg    201 NLQDVAVYGLRFLEENYPERLKKRYDLEEIPEEIAALFDEIGKKRGCLMA    250

BSNT_02623___    251 GGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM-    282
                     ||.||||||||||||||||||||.||||:|.. 
BL01289___rbg    251 GGEINYDKTTEVIIRDIRTEKFGPLSFEKPEDM    283


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