Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02623 and BL01289

See Amino acid alignment / Visit BSNT_02623 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:18
# Commandline: needle
#    -asequence dna-align/BSNT_02623___rbgA.1.5803.seq
#    -bsequence dna-align/BL01289___rbgA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02623___rbgA-BL01289___rbgA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02623___rbgA-BL01289___rbgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02623___rbgA
# 2: BL01289___rbgA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 854
# Identity:     657/854 (76.9%)
# Similarity:   657/854 (76.9%)
# Gaps:           7/854 ( 0.8%)
# Score: 2474.0
# 
#
#=======================================

BSNT_02623___      1 ATGACAATTCAATGGTTCCCGGGCCATATGGCAAAAGCAAGAAGGGAAGT     50
                     |||...||.|||||||||||.||.||||||||.|||||.||..|||||||
BL01289___rbg      1 ATGGTGATCCAATGGTTCCCCGGGCATATGGCCAAAGCGAGGCGGGAAGT     50

BSNT_02623___     51 AACCGAAAAATTAAAATTAATCGATATCGTATATGAATTGGTAGATGCCA    100
                     |||.||||||.|.||..|.|||||.||.|||||.|||.||||.||.||||
BL01289___rbg     51 AACGGAAAAACTCAAGCTGATCGACATTGTATACGAACTGGTCGACGCCA    100

BSNT_02623___    101 GAATTCCAATGTCATCAAGAAACCCAATGATTGAAGATATTCTAAAAAAC    150
                     |||||||.|||||.|||||||||||.|||||.|||||.|||.||||.|||
BL01289___rbg    101 GAATTCCGATGTCTTCAAGAAACCCGATGATCGAAGACATTTTAAAGAAC    150

BSNT_02623___    151 AAGCCGCGAATTATGCTGTTAAACAAGGCTGACAAAGCAGATGCGGCAGT    200
                     ||||||.||||.||||||.|.||||||||.||.|||||.||..|..|.||
BL01289___rbg    151 AAGCCGAGAATCATGCTGCTCAACAAGGCGGATAAAGCGGACTCCTCCGT    200

BSNT_02623___    201 TACACAGCGGTGGAAAGAGCACTTTGAGAAGCAGGGGATCCGCT-CTCTG    249
                     .|||.||...|||||..||||||||||.||..|.||.||.| || |.||.
BL01289___rbg    201 GACAAAGGCTTGGAAGCAGCACTTTGAAAAAGACGGAATTC-CTACCCTC    249

BSNT_02623___    250 TCTATTAATTCTGTAAATGGACAAGGGTTAAATCAAATTGTGCCTGCATC    299
                     .|.||.||.||.||.||.|||||.|||.|.|||||||||.|.||||||||
BL01289___rbg    250 GCCATCAACTCGGTCAACGGACAGGGGCTCAATCAAATTCTTCCTGCATC    299

BSNT_02623___    300 AAAAGAGATCCTCCAAGAAAAATTTGACCGGATGCGTGCGAAAGGTGTGA    349
                     |||||||.|.||..|||||||.|||||....|||...||.||||||||.|
BL01289___rbg    300 AAAAGAGCTGCTGAAAGAAAAGTTTGATAAAATGAAAGCAAAAGGTGTAA    349

BSNT_02623___    350 AGCCGAGAGCGATTCGCGCTTTGATTATCGGCATTCCAAACGTCGGAAAA    399
                     |||||.|.|||||..|.||.|||||..||||.||||||||||||||.|||
BL01289___rbg    350 AGCCGCGCGCGATCAGAGCATTGATCGTCGGTATTCCAAACGTCGGCAAA    399

BSNT_02623___    400 TCAACGCTCATCAACCGGCTTGCAAAGAAAAACATAGCAAAAACGGGAGA    449
                     ||.||..|.||||||||||||||.||.||||||||.||.||||||||.||
BL01289___rbg    400 TCGACCTTGATCAACCGGCTTGCGAAAAAAAACATCGCCAAAACGGGCGA    449

BSNT_02623___    450 CAGACCTGGTATTACGACCTCTCAACAGTGGGTCAAAGTTGGGAAAGAAT    499
                     ||||||.||..|.|||||..|.||.||||||||.||.||.||.|||||..
BL01289___rbg    450 CAGACCCGGAGTAACGACTGCACAGCAGTGGGTGAAGGTCGGAAAAGAGC    499

BSNT_02623___    500 TAGAGCTATTAGATACACCGGGAATTTTGTGGCCTAAATTTGAGGATGAG    549
                     |.|||||..|.|||||||||||.|||||.|||||.||.||||||||.|||
BL01289___rbg    500 TGGAGCTTCTCGATACACCGGGGATTTTATGGCCGAAGTTTGAGGACGAG    549

BSNT_02623___    550 CTTGTCGGTTTGAGACTGGCAGTCACCGGGGCTATTAAAGACTCGATTAT    599
                     ||||||||..||||.||.||.|..||.||.||.||||||||.||||||||
BL01289___rbg    550 CTTGTCGGGCTGAGGCTCGCGGCAACAGGCGCAATTAAAGATTCGATTAT    599

BSNT_02623___    600 TAATTTGCAGGACGTGGCCGTGTTTGGTCTTCGTTTTCTCGAAGAACATT    649
                     .||.||||||||.||.|||||.|..|||.|.||.|||.|.|||||..|||
BL01289___rbg    600 CAACTTGCAGGATGTCGCCGTCTACGGTTTGCGCTTTTTGGAAGAGAATT    649

BSNT_02623___    650 ACCCAGAACGGCTT-AAAGAGCGTTATGGCCTTGATGAGATCCCAGAGGA    698
                     ||||.|||| |||| |||.||||.||||.|||.||.|||||.||.||.||
BL01289___rbg    650 ACCCCGAAC-GCTTAAAAAAGCGCTATGACCTGGAGGAGATTCCTGAAGA    698

BSNT_02623___    699 CATTGCCGAGCTGTTTGATGCAATAGGTGAAAAGCGGGGCTGTCTCATGA    748
                     .|||||.|.|||.|||||||..||.||..||||.||.|||||.||||||.
BL01289___rbg    699 AATTGCAGCGCTTTTTGATGAGATCGGAAAAAAACGCGGCTGCCTCATGG    748

BSNT_02623___    749 GCGGTGGGCTCATCAACTACGATAAGACGACTGAAGTCATCATTCGCGAT    798
                     .|||.||....|||||.|||||.||||||||.|||||||||||.||||||
BL01289___rbg    749 CCGGAGGCGAGATCAATTACGACAAGACGACAGAAGTCATCATCCGCGAT    798

BSNT_02623___    799 ATTCGCACTGAAAAGTTCGGCAGGCTGTCATTTGAACAGCCGACG---AT    845
                     ||.|||||.||||||||||||..|||.||.||||||.|||||..|   ||
BL01289___rbg    799 ATCCGCACCGAAAAGTTCGGCCCGCTTTCTTTTGAAAAGCCGGAGGATAT    848

BSNT_02623___    846 GTAA    849
                     ||||
BL01289___rbg    849 GTAA    852


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