Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02630 and BL01283

See DNA alignment / Visit BSNT_02630 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:19
# Commandline: needle
#    -asequence pep-align/BSNT_02630___smf.1.5803.seq
#    -bsequence pep-align/BL01283___smf.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02630___smf-BL01283___smf.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02630___smf-BL01283___smf.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02630___smf
# 2: BL01283___smf
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 300
# Identity:     171/300 (57.0%)
# Similarity:   216/300 (72.0%)
# Gaps:           3/300 ( 1.0%)
# Score: 887.0
# 
#
#=======================================

BSNT_02630___      1 MDQAAACLTICRINQLLSPSLLLKWWKADPSMSLTSPVLQTVTRDQIKAA     50
                     |:.::..|.:.|:...||||||.||||.|||:|||......:|:..:|.:
BL01283___smf      1 MNDSSELLILLRLRGTLSPSLLTKWWKQDPSLSLTGEKNHLLTKLSLKRS     50

BSNT_02630___     51 ---ALKNEIEQFYPKLPRVLAAYREQGINTIPISSKQYPFWLKSIYDPPA     97
                        :::...||....:.|::.:|...|:....|||..||..||:|:|||.
BL01283___smf     51 DLCSIRKLAEQELSNVKRLIRSYEAAGVRMTAISSPDYPASLKTIHDPPP    100

BSNT_02630___     98 VLFAKGDMTLLSKGRKIGIVGTRNPTAYGKQVVNHLTKEICRKGWVIVSG    147
                     |||.||:..||.:.|.|||||||.|:.|||:....|.:|:|:..|.||||
BL01283___smf    101 VLFLKGNKKLLHEQRLIGIVGTRCPSLYGKRAAVQLVRELCKNSWTIVSG    150

BSNT_02630___    148 LASGIDGMSHAASIKAKGRTIGVIAGGFQHIYPRENLQLADHMAKHHILL    197
                     ||.||||::|..||::||||||||||||..|||||:.|||..||:.|:|:
BL01283___smf    151 LAKGIDGLAHQESIRSKGRTIGVIAGGFNSIYPREHRQLAGQMAESHLLV    200

BSNT_02630___    198 SEHPPETKPQKWHFPMRNRIISGLSEGVIVVQGKEKSGSLITAYQALEQG    247
                     |||||..||||||||||||:||||:||::|||||||||||||||||||||
BL01283___smf    201 SEHPPHIKPQKWHFPMRNRLISGLTEGIVVVQGKEKSGSLITAYQALEQG    250

BSNT_02630___    248 REVFAVPGSLFDPYAGGPIKLIQQGAKAIWSAEDIFEELPERNVQYTEPF    297
                     ||||||||.:||..:.||.:|||:|||.:.:.|||..|||..|.|||||.
BL01283___smf    251 REVFAVPGPIFDANSFGPSRLIQEGAKLVLTIEDILNELPPSNAQYTEPV    300


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