Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02634 and BL01279

See DNA alignment / Visit BSNT_02634 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:20
# Commandline: needle
#    -asequence pep-align/BSNT_02634___xerC.1.5803.seq
#    -bsequence pep-align/BL01279___xerC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02634___xerC-BL01279___xerC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02634___xerC-BL01279___xerC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02634___xerC
# 2: BL01279___xerC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 304
# Identity:     235/304 (77.3%)
# Similarity:   268/304 (88.2%)
# Gaps:           0/304 ( 0.0%)
# Score: 1241.0
# 
#
#=======================================

BSNT_02634___      1 MENVKNFVKLFVEYLQIEKNNSQYTIVNYVDSIEEFETFLRVQGINGFEE     50
                     |.|||||:.||:||||||||.|:||||.|:.|||:||.||.||||.|||:
BL01279___xer      1 MANVKNFLTLFIEYLQIEKNYSKYTIVGYISSIEDFERFLHVQGIKGFED     50

BSNT_02634___     51 AAYQDTRIFLTEAYEKGLSRRTISKKISALRSFYKFLMREKLIEENPFQL    100
                     ..|.|.|||||||:||||:||||||||||||||||||:||||::||||.|
BL01279___xer     51 VTYPDVRIFLTEAHEKGLTRRTISKKISALRSFYKFLLREKLVKENPFLL    100

BSNT_02634___    101 VHLPKQEKRIPKFLYQKELEELFEVSDISQPAGMRDQALLELLYATGMRV    150
                     |.||||:||||||||:|||||||||||:|.|.|.|:|||||.||||||||
BL01279___xer    101 VSLPKQDKRIPKFLYEKELEELFEVSDLSTPLGQRNQALLEFLYATGMRV    150

BSNT_02634___    151 SECCSITINDVDLFMDTVLVHGKGKKQRYIPFGSYAREALKVYMNSGRQC    200
                     ||.||:..:|:|||:|||||||||:|||||||||:|||||.:|:.:||:.
BL01279___xer    151 SELCSLKESDLDLFLDTVLVHGKGRKQRYIPFGSFAREALDLYLQNGRRI    200

BSNT_02634___    201 LLMKAKEPHDLLFVNQRGGPLTARGIRHILSGLVQKASSTLHIHPHMLRH    250
                     ||:|||||...:|:||||||||.||:|:||..||:|.|.|||||||||||
BL01279___xer    201 LLLKAKEPCPFIFLNQRGGPLTPRGVRYILGELVKKTSGTLHIHPHMLRH    250

BSNT_02634___    251 TFATHLLNEGADLRSVQELLGHSNLSSTQIYTHVSKEMLRNTYMSHHPRA    300
                     |||||||||||||||||||||||||||||:||||||:|||.|||||||||
BL01279___xer    251 TFATHLLNEGADLRSVQELLGHSNLSSTQVYTHVSKDMLRKTYMSHHPRA    300

BSNT_02634___    301 FKKN    304
                     .|..
BL01279___xer    301 HKGK    304


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