Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02634 and BL01279
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:20
# Commandline: needle
# -asequence dna-align/BSNT_02634___xerC.1.5803.seq
# -bsequence dna-align/BL01279___xerC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02634___xerC-BL01279___xerC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02634___xerC-BL01279___xerC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02634___xerC
# 2: BL01279___xerC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 949
# Identity: 675/949 (71.1%)
# Similarity: 675/949 (71.1%)
# Gaps: 68/949 ( 7.2%)
# Score: 2222.5
#
#
#=======================================
BSNT_02634___ 1 ATGGAGAATGTTAAGAATTTCGTAAAGTTATTCGTTGAATATTTACAAAT 50
||||..||||||||||||||..|||..||||||.||||||||||||||||
BL01279___xer 1 ATGGCAAATGTTAAGAATTTTTTAACTTTATTCATTGAATATTTACAAAT 50
BSNT_02634___ 51 TGAAAAAAATAATTCACAATATACTATTGTGAATTATGTGGATTCAATTG 100
.|||||.|||.|||||.|||||||.||||||..|||..|...|||.||||
BL01279___xer 51 AGAAAAGAATTATTCAAAATATACAATTGTGGGTTACATTTCTTCCATTG 100
BSNT_02634___ 101 AAGAATTCGAGAC---TTTCCTGCGCGTTCAAGGTATAAATGGATTTGAA 147
||||.||.|| || ||| |.|.||||||.||.|||||.||.||||||
BL01279___xer 101 AAGACTTTGA-ACGCTTTT--TACACGTTCAGGGCATAAAGGGTTTTGAA 147
BSNT_02634___ 148 GAAGCTG-CATATCAAGATACTAGGATTTTTTTGACAGAAGCCTATGAAA 196
||.| || |.||||..|||...||.|||||.|||||.|||||..||||||
BL01279___xer 148 GACG-TGACTTATCCGGATGTGAGAATTTTCTTGACGGAAGCGCATGAAA 196
BSNT_02634___ 197 AAGGTTTATCGAGAAGAACAATAAGCAAAAAGATATCTGCATTAAGAAGC 246
||||..|..|..|.||.||.||.|||||.||.||.||.||..|..|.|||
BL01279___xer 197 AAGGGCTCACTCGCAGGACGATCAGCAAGAAAATTTCGGCTCTGCGTAGC 246
BSNT_02634___ 247 TTTTATAAGTTTCTGATGCGGGAAAAGCTTATTGAAGAAAATCCGTTTCA 296
||.|||||.|||.|..|..||||||||||..|..|||||||.|||||||.
BL01279___xer 247 TTCTATAAATTTTTATTAAGGGAAAAGCTGGTAAAAGAAAACCCGTTTCT 296
BSNT_02634___ 297 GCTTGTTCA-TCTGCCAAAACAGGAGAAACGGATACCGAAGTTTCTATAT 345
||||| ||| |||.||.||||||||.||.|||||.|||||||||.|||||
BL01279___xer 297 GCTTG-TCAGTCTCCCGAAACAGGATAAGCGGATTCCGAAGTTTTTATAT 345
BSNT_02634___ 346 CAAAAAGAGCTTGAGGAGCTGTTTGAAGTTTCAGATATAAG----CCAGC 391
.||||.||.|||||.||.||||||||.|||||.|||.|.|| || ||
BL01279___xer 346 GAAAAGGAACTTGAAGAACTGTTTGAGGTTTCGGATTTGAGTACACC-GC 394
BSNT_02634___ 392 -CGGCCGGAATGAGGGATCAAGCGCTGTTAGAGCTGCTCTATGCCACCGG 440
||||| || ||..||||.|||||..|.||..|.|||||.||.||.||
BL01279___xer 395 TCGGCC--AA--AGAAATCAGGCGCTCCTGGAATTTCTCTACGCGACAGG 440
BSNT_02634___ 441 AATGAGGGTCAGTGAA---TGCTGTTCCATAACTATTAACGACGTTGATT 487
.|||.||||.||.||| |||.| || |.||.||...|||||
BL01279___xer 441 CATGCGGGTAAGCGAACTTTGCAG--CC-------TGAAGGAATCTGATT 481
BSNT_02634___ 488 ------TATTTATGGACACTGTGCTTGTTCACGGTAAAGGCAAGAAGCAG 531
|.|||.|.||.||.||..|.||.|||||.|||||||.||||||.
BL01279___xer 482 TGGATCTGTTTTTAGATACGGTTTTGGTCCACGGGAAAGGCAGGAAGCAA 531
BSNT_02634___ 532 CGCTATATCCCCTTTGGGTCTTATGCCCGCGAAGCGTTGAAGGTATACAT 581
.|.|||||.||.|||||.||.|..|||||.||.||.|||.|..|.||..|
BL01279___xer 532 AGGTATATTCCATTTGGTTCATTCGCCCGGGAGGCTTTGGATCTGTATTT 581
BSNT_02634___ 582 GAATAGCGGAAGACAG--TGCTTGCTGATGAAGGCAAAAGAACCTCATGA 629
|.|.|..||||||| | |.||| |||.|.||.||.|||||.| |.||.
BL01279___xer 582 GCAAAATGGAAGAC-GCATCCTT-CTGTTAAAAGCGAAAGAGC--CCTGC 627
BSNT_02634___ 630 TCTATTA--TTCGTAAATCAAAGAGGCGGACCGCTTACAGCCC---GTGG 674
.||.||| ||..|.||||||||.|||||.|| |||| |.||| |.||
BL01279___xer 628 CCTTTTATTTTTTTGAATCAAAGGGGCGGGCC-CTTA-ACCCCGAGGGGG 675
BSNT_02634___ 675 CATCAGACATATTTTAAGCGGG----CTTGTTCAAAAAG-CGTCAAGCAC 719
..|| |..|.||||| ||| | ||.||||.||| |.||..|.||
BL01279___xer 676 GTTC-GTTACATTTT----GGGAGAAC-TGGTCAAGAAGACTTCGGGTAC 719
BSNT_02634___ 720 TTTACATATCCATCCGCATATGCTTCGACATACGTTCGCCACGCATCTGT 769
.||||||||.||||||||||||||.||.|||||.||.|||||.|||.|||
BL01279___xer 720 ATTACATATACATCCGCATATGCTCCGCCATACATTTGCCACCCATTTGT 769
BSNT_02634___ 770 TAAATGAAGGAGCGGATTTGAGAAGCGTTCAAGAACTGCTCGGGCATTCC 819
|||||||.||.||||||.||||.||||||||.||||||||.||||||||.
BL01279___xer 770 TAAATGAGGGTGCGGATCTGAGGAGCGTTCAGGAACTGCTTGGGCATTCA 819
BSNT_02634___ 820 AATCTGTCTTCTACACAGATATACACGCACGTTTCGAAGGAAATGTTGAG 869
|||||.|||||.||.|||.|.||.|||||.||.||.||.||.|||.|.||
BL01279___xer 820 AATCTTTCTTCAACCCAGGTGTATACGCATGTATCTAAAGATATGCTCAG 869
BSNT_02634___ 870 AAACACATATATGTCTCACCATCCAAGAGCATTTAA---GAAAAATTAA 915
|||.||||||||||||||.||.||..|.|||..||| |||| |||
BL01279___xer 870 AAAGACATATATGTCTCATCACCCTCGGGCACATAAAGGGAAA---TAA 915
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