Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02670 and BL01256
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:22
# Commandline: needle
# -asequence pep-align/BSNT_02670.1.5803.seq
# -bsequence pep-align/BL01256___fliR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02670-BL01256___fliR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02670-BL01256___fliR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02670
# 2: BL01256___fliR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity: 151/258 (58.5%)
# Similarity: 176/258 (68.2%)
# Gaps: 64/258 (24.8%)
# Score: 772.0
#
#
#=======================================
BSNT_02670 0 -------------------------------------------------- 0
BL01256___fli 1 MSIIESFPAFLLVFVRITAFYVTVPLFSYRTIPAVHKIGFAFFLALVSFQ 50
BSNT_02670 1 --------------MLLAFKEALVGLCLGLIAYMMIAAVQIAGSFIDFQM 36
|:||.||||:||.|||||||||:|||||||||||||
BL01256___fli 51 AIEKPPHLDVDGIYMMLAMKEALIGLLLGLIAYMMISAVQIAGSFIDFQM 100
BSNT_02670 37 GFSIANVIDPQTGAQSPLIGQFIYTMALLFMLSVNAHHLLLDGIYYSFQY 86
||::||||||||||||||:|||:||||||.|||:|||||||||||||:||
BL01256___fli 101 GFAVANVIDPQTGAQSPLVGQFLYTMALLLMLSLNAHHLLLDGIYYSYQY 150
BSNT_02670 87 ISVDQAFPNFGDEKFAYFIAKSFNAMFIIAFQMSAPVVASLFLVDLALGI 136
|.||:...:||.|:||.|||||||.|||.|||:||||||.||||||||||
BL01256___fli 151 IPVDKMALSFGSEEFAEFIAKSFNTMFITAFQLSAPVVACLFLVDLALGI 200
BSNT_02670 137 VARTVPQLNVFVVGLPLKIAVSFIMLIVCMSVIFVVVRNVFSLTIETMRN 186
||||||||||||||||||||::|||||:||:|:|.::::||...|.|||:
BL01256___fli 201 VARTVPQLNVFVVGLPLKIAITFIMLIICMAVMFSMMQHVFEFAIRTMRD 250
BSNT_02670 187 LLALVGVS 194
||.|:||:
BL01256___fli 251 LLTLLGVA 258
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