Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02682 and BL01247

See DNA alignment / Visit BSNT_02682 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:23
# Commandline: needle
#    -asequence pep-align/BSNT_02682___cheD.1.5803.seq
#    -bsequence pep-align/BL01247___cheD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02682___cheD-BL01247___cheD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02682___cheD-BL01247___cheD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02682___cheD
# 2: BL01247___cheD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 168
# Identity:     125/168 (74.4%)
# Similarity:   144/168 (85.7%)
# Gaps:           2/168 ( 1.2%)
# Score: 637.0
# 
#
#=======================================

BSNT_02682___      1 --MSTTEAVVIKVGIADVKIARFPDTIRTSGLGSCVGLVLYDKEKQTAGL     48
                       :...|..:|:||||||||.|.||.||||||||||||||||.|.:||||
BL01247___che      1 MKILEKETSIIRVGIADVKIVRTPDKIRTSGLGSCVGLVLYDLEAKTAGL     50

BSNT_02682___     49 VHVMLPDSTLSKTAELNRAKYADTAVQTTIDMLIEAGCRKFALKAKLAGG     98
                     ||||||||:||||.::|.||||||||:.|:.||:||||||:|||||:|||
BL01247___che     51 VHVMLPDSSLSKTPDINVAKYADTAVEATVKMLLEAGCRKYALKAKMAGG    100

BSNT_02682___     99 SEMFKFKSTNDLMKIGPRNVLAIKEQLSLFNIPIISEDTGGSSGRTIEFE    148
                     :||||||.||||||:|||||||||:.|||.||||:||||||:|||||||:
BL01247___che    101 AEMFKFKMTNDLMKVGPRNVLAIKKHLSLLNIPIVSEDTGGNSGRTIEFD    150

BSNT_02682___    149 PKSCMLHIRTVKQGEKTI    166
                     |:|..|.|||||||..||
BL01247___che    151 PQSAELVIRTVKQGVTTI    168


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