Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02685 and BL01244

See DNA alignment / Visit BSNT_02685 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:24
# Commandline: needle
#    -asequence pep-align/BSNT_02685___rpsB.1.5803.seq
#    -bsequence pep-align/BL01244___rpsB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02685___rpsB-BL01244___rpsB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02685___rpsB-BL01244___rpsB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02685___rpsB
# 2: BL01244___rpsB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     234/246 (95.1%)
# Similarity:   239/246 (97.2%)
# Gaps:           0/246 ( 0.0%)
# Score: 1186.0
# 
#
#=======================================

BSNT_02685___      1 MSVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKV     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL01244___rps      1 MSVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKV     50

BSNT_02685___     51 EEAYNFTKNLAAEGGKILFVGTKKQAQDSVKEEAQRSGMYYVNQRWLGGT    100
                     ||||||||||||:|||||||||||||||||||||:|||||||||||||||
BL01244___rps     51 EEAYNFTKNLAADGGKILFVGTKKQAQDSVKEEAERSGMYYVNQRWLGGT    100

BSNT_02685___    101 LTNFETIQKRIKRLKDIEKMQENGTFDVLPKKEVVQLKKELERLEKFLGG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL01244___rps    101 LTNFETIQKRIKRLKDIEKMQENGTFDVLPKKEVVQLKKELERLEKFLGG    150

BSNT_02685___    151 IKDMKDLPDALFIIDPRKERIAVAEARKLNIPIIGIVDTNCDPDEIDVVI    200
                     ||:||:||||||||||||||||||||||||||||||||||||||||||||
BL01244___rps    151 IKEMKELPDALFIIDPRKERIAVAEARKLNIPIIGIVDTNCDPDEIDVVI    200

BSNT_02685___    201 PANDDAIRAVKLLTSKMADAILEAKQGEEEAEVAEETAPETETTTA    246
                     |||||||||||||||||||||||||||||.||...:.|..||||||
BL01244___rps    201 PANDDAIRAVKLLTSKMADAILEAKQGEESAETEAKEAETTETTTA    246


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.