Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02685 and BL01244
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:24
# Commandline: needle
# -asequence dna-align/BSNT_02685___rpsB.1.5803.seq
# -bsequence dna-align/BL01244___rpsB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02685___rpsB-BL01244___rpsB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02685___rpsB-BL01244___rpsB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02685___rpsB
# 2: BL01244___rpsB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 746
# Identity: 659/746 (88.3%)
# Similarity: 659/746 (88.3%)
# Gaps: 10/746 ( 1.3%)
# Score: 2944.0
#
#
#=======================================
BSNT_02685___ 1 ATGTCAGTCATTTCTATGAAGCAATTGCTTGAAGCTGGTGTTCACTTCGG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BL01244___rps 1 ATGTCAGTCATTTCTATGAAGCAATTGCTTGAAGCTGGTGTTCACTTCGG 50
BSNT_02685___ 51 TCACCAAACACGCCGTTGGAACCCAAAAATGAAGCGTTACATTTTCACGG 100
.||||||||.|||||.||||||||||||||||||||||||||.|||||||
BL01244___rps 51 CCACCAAACGCGCCGCTGGAACCCAAAAATGAAGCGTTACATCTTCACGG 100
BSNT_02685___ 101 AGCGTAACGGAATCTACATCATTGACCTTCAAAAAACAGTCAAAAAAGTA 150
||||||||||||||||||||||.||.|||||||||||||||||||||||.
BL01244___rps 101 AGCGTAACGGAATCTACATCATCGATCTTCAAAAAACAGTCAAAAAAGTT 150
BSNT_02685___ 151 GAGGAAGCTTACAACTTCACTAAAAATCTTGCTGCTGAAGGCGGAAAAAT 200
||.|||||.|||||||||||.|||||.|||||.|||||.||.||||||||
BL01244___rps 151 GAAGAAGCATACAACTTCACGAAAAACCTTGCAGCTGACGGAGGAAAAAT 200
BSNT_02685___ 201 CCTTTTCGTCGGAACAAAAAAACAAGCTCAAGATTCTGTTAAAGAAGAAG 250
||||||||||||.||.|||||.|||||||||||.||||||||||||||||
BL01244___rps 201 CCTTTTCGTCGGTACGAAAAAGCAAGCTCAAGACTCTGTTAAAGAAGAAG 250
BSNT_02685___ 251 CTCAACGCTCTGGCATGTACTATGTCAACCAACGCTGGTTGGGCGGTACA 300
|..||||.|||||.||||||||||||||||||||||||.|.|||||||||
BL01244___rps 251 CGGAACGTTCTGGAATGTACTATGTCAACCAACGCTGGCTTGGCGGTACA 300
BSNT_02685___ 301 TTAACAAACTTCGAAACAATCCAAAAACGTATTAAACGTCTTAAAGACAT 350
|||||||||||.|||||.||||||||.|||||.|||||.||||||||.||
BL01244___rps 301 TTAACAAACTTTGAAACGATCCAAAAGCGTATCAAACGCCTTAAAGATAT 350
BSNT_02685___ 351 TGAAAAAATGCAAGAAAACGGTACGTTTGATGTACTTCCTAAAAAAGAAG 400
.|||||||||||.||||||||.||.|||||.|||||||||||||||||||
BL01244___rps 351 CGAAAAAATGCAGGAAAACGGCACATTTGACGTACTTCCTAAAAAAGAAG 400
BSNT_02685___ 401 TTGTTCAATTGAAAAAAGAATTAGAGCGTCTTGAAAAATTCCTAGGCGGA 450
|.|||||||||||||||||||||||||||||||||||||||||.||||||
BL01244___rps 401 TCGTTCAATTGAAAAAAGAATTAGAGCGTCTTGAAAAATTCCTCGGCGGA 450
BSNT_02685___ 451 ATTAAAGATATGAAGGATCTTCCTGATGCATTATTCATCATCGATCCTCG 500
||.|||||.|||||.||.||||||||.|||.|.|||||||||||||||||
BL01244___rps 451 ATCAAAGAAATGAAAGAGCTTCCTGACGCACTGTTCATCATCGATCCTCG 500
BSNT_02685___ 501 CAAAGAGCGCATCGCTGTTGCGGAAGCTCGCAAATTAAACATCCCTATCA 550
|||||||||||||||.|||||.|||||.||||||.|.|||||.||.||||
BL01244___rps 501 CAAAGAGCGCATCGCGGTTGCAGAAGCGCGCAAACTGAACATTCCGATCA 550
BSNT_02685___ 551 TCGGTATCGTAGATACTAACTGTGATCCAGATGAAATCGATGTTGTTATC 600
||||.|||||.||.||.|||||.|||||.|||||||||||||||||.|||
BL01244___rps 551 TCGGAATCGTTGACACAAACTGCGATCCTGATGAAATCGATGTTGTCATC 600
BSNT_02685___ 601 CCAGCGAACGATGACGCTATCCGCGCTGTTAAACTTCTAACTTCTAAAAT 650
||.||||||||||||||.|||||||||||||||.|.||.|||||||||||
BL01244___rps 601 CCTGCGAACGATGACGCCATCCGCGCTGTTAAATTGCTGACTTCTAAAAT 650
BSNT_02685___ 651 GGCAGATGCAATCTTAGAAGCGAAGCAAGGCGAAGAAGAAGCGGAAGTTG 700
|||||||||.|||.|.|||||.||.|||||.||||||..|||.||| .
BL01244___rps 651 GGCAGATGCCATCCTTGAAGCAAAACAAGGTGAAGAATCAGCTGAA---A 697
BSNT_02685___ 701 CTGAA--GAAACTGCACCAGAAACA---GAAACAACAACTGCGTAA 741
|.||| |||| |.|.|||||||| ||||||||||||||.|||
BL01244___rps 698 CAGAAGCGAAA--GAAGCAGAAACAACTGAAACAACAACTGCTTAA 741
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