Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02691 and BL01238

See DNA alignment / Visit BSNT_02691 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:24
# Commandline: needle
#    -asequence pep-align/BSNT_02691___cdsA.1.5803.seq
#    -bsequence pep-align/BL01238___cdsA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02691___cdsA-BL01238___cdsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02691___cdsA-BL01238___cdsA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02691___cdsA
# 2: BL01238___cdsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     178/270 (65.9%)
# Similarity:   215/270 (79.6%)
# Gaps:           7/270 ( 2.6%)
# Score: 923.0
# 
#
#=======================================

BSNT_02691___      1 MKQRILTGVLAAIVFLFLVIVGKLPFTILIYAMGSVALFELLRMKKLKLV     50
                     |||||||||:||.|||.|||.|:||||:|:||:|.:|||||||||.|||:
BL01238___cds      1 MKQRILTGVIAAAVFLPLVIFGELPFTLLVYAIGILALFELLRMKGLKLI     50

BSNT_02691___     51 SLPGLIGLLLLWMFLLPSQYSFFEADGISKMEIALFAVLLLLTYTVLVKN    100
                     |.||:|.:|||.:.|.||||:.....||:|.|:...||||||.||||.||
BL01238___cds     51 SAPGIISMLLLAVLLCPSQYAEDAGLGITKGEVVFLAVLLLLAYTVLSKN    100

BSNT_02691___    101 TFTFDEVGFITLAAIYIGMCFHYFIEIRNLDQYGLTYIFYACVVIWSTDS    150
                     :|||||..|:.|||:|||..|:|||||||:   ||:|:|:|..|:|||||
BL01238___cds    101 SFTFDEAAFVALAAVYIGFGFYYFIEIRNI---GLSYVFFAIGVVWSTDS    147

BSNT_02691___    151 GAYFVGKSLGKRKLWPEISPNKTVEGFAGGIVIALVLATIFQLVAQLPIP    200
                     ||||:||:.||||||||||||||||||.|||:.|:|.:.|:|.....|..
BL01238___cds    148 GAYFIGKAFGKRKLWPEISPNKTVEGFWGGILTAVVFSAIYQAATGFPHA    197

BSNT_02691___    201 YIYLLLITLFLSVFGQLGDLVESALKRHYDVKDSGKILPGHGGILDRFDS    250
                     |:::|:||:.||:.||:|||.|||.||||.|||||:|||||||:||||||
BL01238___cds    198 YLFVLIITVLLSIVGQIGDLAESAFKRHYQVKDSGRILPGHGGMLDRFDS    247

BSNT_02691___    251 FLFVMPFLYFLLALFS----    266
                     ||||||.|||||.||.    
BL01238___cds    248 FLFVMPVLYFLLVLFQPFGL    267


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