Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02708 and BL01220

See DNA alignment / Visit BSNT_02708 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:27
# Commandline: needle
#    -asequence pep-align/BSNT_02708___ribC.1.5803.seq
#    -bsequence pep-align/BL01220___ribC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02708___ribC-BL01220___ribC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02708___ribC-BL01220___ribC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02708___ribC
# 2: BL01220___ribC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 320
# Identity:     211/320 (65.9%)
# Similarity:   255/320 (79.7%)
# Gaps:           5/320 ( 1.6%)
# Score: 1137.0
# 
#
#=======================================

BSNT_02708___      1 MKTIHITHPHHLIKEEQAKSVMALGYFDGVHLGHQKVICTAKQIAEEKGL     50
                     ||||||:|||.|.:|:...||||||||||||||||:||.|||..|..:|:
BL01220___rib      1 MKTIHISHPHDLKREDFPTSVMALGYFDGVHLGHQQVILTAKNTAAREGV     50

BSNT_02708___     51 TLAVMTFHPHPSHVLGRDKEPKDLITPLEDKINQIEQLGTEVLYVVKFNE    100
                     ..:|||||||||.||.:.:|||||||||:|||:.||.||.:.||||.|..
BL01220___rib     51 KTSVMTFHPHPSAVLKKGREPKDLITPLQDKISIIEDLGVDFLYVVTFTP    100

BSNT_02708___    101 VFASLSPKQFIDQYIIGLNVQHAVAGFDFTYGKYGKGTMKTMPDDLDGKA    150
                     .||||||::||||||:|.:|.|.|||||||:||:|||||:...:...|:.
BL01220___rib    101 EFASLSPEEFIDQYILGFHVTHVVAGFDFTFGKFGKGTMENFQEYAKGRV    150

BSNT_02708___    151 GCTMVEKLTEQDKKISSSYIRTALQNGDVELANVLLGQPYFIKGIVIHGD    200
                     ..|.|.|.:.||:|:||:.||:.|..||||.|..|||:||.:||.|||||
BL01220___rib    151 KSTSVAKYSNQDQKVSSTRIRSVLGAGDVEYAAELLGRPYHVKGFVIHGD    200

BSNT_02708___    201 KRGRTIGFPTANVGLNNSYIVPPTGVYAVKAEVNGEVYNGVCNIGYKPTF    250
                     ||||||||||||:||.::||||||||||||||:.|.|||||||:||||||
BL01220___rib    201 KRGRTIGFPTANIGLKDTYIVPPTGVYAVKAEIGGAVYNGVCNVGYKPTF    250

BSNT_02708___    251 YEKRPEQPSIEVNLFDFDQEVYGAAIKIEWYKRIRSERKFNGIKELTEQI    300
                     |||||.||||||||||||:::||:.||:|||||:|||:||..:.||.|||
BL01220___rib    251 YEKRPGQPSIEVNLFDFDRDIYGSEIKVEWYKRLRSEKKFGSVDELVEQI    300

BSNT_02708___    301 EKDKQEAIRYFSNLRK----    316
                     .:||:||||:|.. ||    
BL01220___rib    301 SRDKEEAIRFFRE-RKPAGI    319


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