Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02710 and BL01216
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:27
# Commandline: needle
# -asequence pep-align/BSNT_02710___ylxY.1.5803.seq
# -bsequence pep-align/BL01216___ylxY.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02710___ylxY-BL01216___ylxY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02710___ylxY-BL01216___ylxY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02710___ylxY
# 2: BL01216___ylxY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 320
# Identity: 226/320 (70.6%)
# Similarity: 270/320 (84.4%)
# Gaps: 1/320 ( 0.3%)
# Score: 1233.0
#
#
#=======================================
BSNT_02710___ 1 MYKKFVPFAVFLFLFFVSFEMMENPHALDYIGAMKKDTVTVTASKDQLYE 50
|....|..:||.||..:|::||..|::..||.|||||.|||.|.||.||:
BL01216___ylx 1 MKGTIVRISVFFFLLLMSYQMMNRPYSQHYIDAMKKDAVTVAAQKDDLYQ 50
BSNT_02710___ 51 ELLQKAPEYEVKPQNARIDKVWKSIPGYNGLKVNIEQSYKKMKKHGEFRE 100
||||||||||||.|||:||.:||::|||||||||||:||||||:.|||.|
BL01216___ylx 51 ELLQKAPEYEVKAQNAKIDHIWKAMPGYNGLKVNIEKSYKKMKQAGEFDE 100
BSNT_02710___ 101 KDLVYSQVKPSVHLESLQPEPIYKGNPDKPMVAFLINVAWGNEYLEKMLP 150
|.|||.||||.||||||:|||||:|:||||||:|:|||||||||||:|||
BL01216___ylx 101 KLLVYDQVKPDVHLESLKPEPIYRGHPDKPMVSFIINVAWGNEYLEEMLP 150
BSNT_02710___ 151 ILQKHQVKATFFLEGNWVRNNEKLAKKIAKDGHEIGNHSYNHPDMSKLTT 200
:||:|::||||||||.||:::.:|||.|...||||||||||||||||||.
BL01216___ylx 151 VLQQHRIKATFFLEGRWVKHHPELAKAIQNGGHEIGNHSYNHPDMSKLTR 200
BSNT_02710___ 201 GRISEQLDKTNEQIEQTIGVKPKWFAPPSGSFRKAVIDIAAEKQMGTVMW 250
.||||||..|||||::|:||||||||||||||||.|:|.|.:..|||:||
BL01216___ylx 201 ERISEQLRMTNEQIQETLGVKPKWFAPPSGSFRKEVVDQAHKMGMGTIMW 250
BSNT_02710___ 251 TVDTIDWQKPAPSVLQTRVLSKIHNGAMILMHPTDPTAESLEALITQIKD 300
||||||||||.|:|||.|||||:|||||||||||||||:||..||..:.:
BL01216___ylx 251 TVDTIDWQKPQPAVLQQRVLSKVHNGAMILMHPTDPTAKSLAVLIQNLHE 300
BSNT_02710___ 301 KGYALGTVTELMDETRLLK- 319
|||.:|||::||:|.||::
BL01216___ylx 301 KGYQIGTVSQLMNEKRLVEE 320
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