Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02710 and BL01216
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:27
# Commandline: needle
# -asequence dna-align/BSNT_02710___ylxY.1.5803.seq
# -bsequence dna-align/BL01216___ylxY.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02710___ylxY-BL01216___ylxY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02710___ylxY-BL01216___ylxY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02710___ylxY
# 2: BL01216___ylxY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1002
# Identity: 710/1002 (70.9%)
# Similarity: 710/1002 (70.9%)
# Gaps: 81/1002 ( 8.1%)
# Score: 2337.0
#
#
#=======================================
BSNT_02710___ 1 -----ATGTACAAAAAATTTGTACCGTTTGCCGTTTTTTTATTTCTTTTT 45
|.|.||.| ||||.|.|.||.||||||||||.||||||||.
BL01216___ylx 1 TTGAAAGGAACGA-----TTGTTCGGATTTCCGTTTTTTTCTTTCTTTTG 45
BSNT_02710___ 46 TTTGTCTCATTTGAGATGATGGAAAATCCGCATGCACTTGATTATATAGG 95
.|..|.||.|.|.||||||||.|...||||.||.|||...||||.||||.
BL01216___ylx 46 CTGATGTCCTATCAGATGATGAACCGTCCGTATTCACAACATTACATAGA 95
BSNT_02710___ 96 GGCAATGAAAAAAGATACGGTGACTGTCACGGCGTCAAAA-GACCAATTA 144
.||.|||||||||||..||||.||.||..|.|| |||||| |||.|.||.
BL01216___ylx 96 TGCGATGAAAAAAGACGCGGTCACGGTTGCCGC-TCAAAAGGACGATTTG 144
BSNT_02710___ 145 TATGAAGAATTGCTT---CAAAAAGCGCCGGAGTACGAAGTTAAGCCCCA 191
||..|.|| |||| |||||||||||.||.||.|||||.|||.||||
BL01216___ylx 145 TACCAGGA---GCTTTTGCAAAAAGCGCCTGAATATGAAGTGAAGGCCCA 191
BSNT_02710___ 192 GAATGCAAGAATTGATAAAGTGTGGAAAAGC-ATTCCAGGCTACAATGGA 240
||||||.|.|||||||.|..|.||| ||||| ||.||.||||||||.||.
BL01216___ylx 192 GAATGCGAAAATTGATCACATATGG-AAAGCGATGCCCGGCTACAACGGC 240
BSNT_02710___ 241 TTAAAGGTCAATATTGAACAATCATATAAAAAAATGAAAAAGCATGGTGA 290
|||||.||.||.||.|||.||||.||.||||||||||||.||...|||||
BL01216___ylx 241 TTAAAAGTAAACATCGAAAAATCGTACAAAAAAATGAAACAGGCCGGTGA 290
BSNT_02710___ 291 GTTT--CGGGAAAAAGAT--TTGGTGTACAGTCAAGTAAAACCAAGTGTT 336
.||| .|.||||..|.| ||..|| || |||||.||.||....|||
BL01216___ylx 291 ATTTGATGAGAAACTGCTCGTTTATG-AC---CAAGTGAAGCCTGACGTT 336
BSNT_02710___ 337 CATCTTGAGTCACTT-CAGCCTGAGCCTATTTATAAAGGAAATCCTGACA 385
|||.|.||.|| ||| .||||||||||.||.||....|||.|.||.||.|
BL01216___ylx 337 CATTTAGAATC-CTTAAAGCCTGAGCCGATCTACCGCGGACACCCGGATA 385
BSNT_02710___ 386 AACCGATGGTGGCTTTTTTAATCAATGTGGCATGGGGAAATGAGTATTTG 435
||||||||||..|.|||.|.||||||||.||.|||||.|||||.|||||.
BL01216___ylx 386 AACCGATGGTATCGTTTATTATCAATGTCGCTTGGGGTAATGAATATTTA 435
BSNT_02710___ 436 GAAAAAATGCTCCCTATTCTGCAAAAGCACCAGGTTAAAGCTACGTTCTT 485
|||.|.|||||.||..|..|.|||.||||.|...|.|||||.||.||.||
BL01216___ylx 436 GAAGAGATGCTTCCCGTCTTACAACAGCATCGTATCAAAGCCACCTTTTT 485
BSNT_02710___ 486 TTTAGAAGGCAATTGGGTGAGAAACAATGA---AAAGCTCGCTAAGAAG- 531
|.|.||.||||..|||||| ||..||.| ..||||.||.| |||
BL01216___ylx 486 TCTGGAGGGCAGATGGGTG---AAGCATCACCCCGAGCTGGCCA--AAGC 530
BSNT_02710___ 532 -ATTGCAAAA-GACGGACATGAAATCGGAAATCATTCATACAATCATCCG 579
| |.||||| |.|||.||||||||||||||.||||||||||||||||||
BL01216___ylx 531 CA-TACAAAACGGCGGGCATGAAATCGGAAACCATTCATACAATCATCCG 579
BSNT_02710___ 580 GATATGAGCAAACTGACTACAGGAAGAATTTCCGAGCAGCT-CGACAAGA 628
|||||||||||||||||.|.||.|.|.|||||.||.||||| || .|.||
BL01216___ylx 580 GATATGAGCAAACTGACGAGAGAACGTATTTCAGAACAGCTGCG-GATGA 628
BSNT_02710___ 629 CTAATGAACAAATAGAACAAACGATCGGCGTTAAGCCAAAGTGGTTCGCT 678
|.||||||||||||.|..|||||.|.|||||.|||||.|||||||||||.
BL01216___ylx 629 CAAATGAACAAATACAGGAAACGCTTGGCGTCAAGCCGAAGTGGTTCGCC 678
BSNT_02710___ 679 CCGCCAAGCGGAAGTTTCAGAAAAGCGGTTATCGACATTGCAG-----CA 723
|||||.|||||.||.|||.|.||||.||||.|.|| .||| ||
BL01216___ylx 679 CCGCCGAGCGGCAGCTTCCGCAAAGAGGTTGTGGA----TCAGGCTCACA 724
BSNT_02710___ 724 GAGAAACAGATGGGAACAGTCATGTGGACAGTTGATACAATCGATTGGCA 773
|||....|||||||||..|||||||||||||||||||.|||||||||||
BL01216___ylx 725 -AGATGGGGATGGGAACGATCATGTGGACAGTTGATACGATCGATTGGCA 773
BSNT_02710___ 774 AA------AGCCGGCTCCGTCTGTACTTCAGACGAGAGTGTTAAGCAAGA 817
.| |||||| |||||| |||..|| || |.||.||||||||..
BL01216___ylx 774 GAAACCGCAGCCGG--CCGTCT-TACAGCA-AC--GGGTATTAAGCAAAG 817
BSNT_02710___ 818 TACATAATGGTGCCATGATTTTAATGCATCCGACTGACCCTACGGCGGAA 867
|||||||.||.||||||||.||||||||||||||.||.||.||.||..||
BL01216___ylx 818 TACATAACGGCGCCATGATATTAATGCATCCGACAGATCCAACTGCAAAA 867
BSNT_02710___ 868 AGTCTTGAAGCGCTGATTACACAGA---TAAAAGACAAAGGATATGCGCT 914
|||||||..|...|||| ||||| |..|.||.|||||.|||....|
BL01216___ylx 868 AGTCTTGCCGTTTTGAT---ACAGAACCTGCATGAAAAAGGCTATCAAAT 914
BSNT_02710___ 915 TGGAACAG--TCACTGAACTAATGGATGAAACAAGAC-TATTGAAGTAA- 960
.|||||.| |||| |.||.|||.||||||.|||.| |.|||||| ||
BL01216___ylx 915 CGGAACTGTTTCAC--AGCTGATGAATGAAAAAAGGCTTGTTGAAG-AAT 961
BSNT_02710___ 960 -- 960
BL01216___ylx 962 AG 963
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