Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02728 and BL01203

See DNA alignment / Visit BSNT_02728 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:29
# Commandline: needle
#    -asequence pep-align/BSNT_02728___ymfC.1.5803.seq
#    -bsequence pep-align/BL01203___ymfC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02728___ymfC-BL01203___ymfC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02728___ymfC-BL01203___ymfC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02728___ymfC
# 2: BL01203___ymfC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 241
# Identity:     186/241 (77.2%)
# Similarity:   214/241 (88.8%)
# Gaps:           0/241 ( 0.0%)
# Score: 974.0
# 
#
#=======================================

BSNT_02728___      1 MSTKADNRHLYLKVIERIKEDIKNGIYTEKEKLPSEFELSKKLGVSRATL     50
                     ||.||||:.|.||||:|||:||:||::.|.|:|||||||||.|||||..|
BL01203___ymf      1 MSIKADNQRLCLKVIDRIKDDIQNGVFCENERLPSEFELSKMLGVSRTAL     50

BSNT_02728___     51 REALRILEEEHVIIRRHGVGTFVHSKPLFLSGIEQLNSVTKMIEQANMTP    100
                     ||||||||||:|||||||||.||:::||||||||||||||||||||:|||
BL01203___ymf     51 REALRILEEENVIIRRHGVGHFVNARPLFLSGIEQLNSVTKMIEQASMTP    100

BSNT_02728___    101 GTIFLSSQVLMPSEDDTKRFHLAEGQELFYLERVRTADGQPIVYCIDKIP    150
                     ||||:||||..|:|:|..||..||..|:|.|||||||:|.|:|||:||||
BL01203___ymf    101 GTIFMSSQVTAPTEEDMLRFQYAEETEIFLLERVRTANGMPVVYCLDKIP    150

BSNT_02728___    151 MNILPNSFSHQQESMFDLLEKNSGSVISYAVTDIEPIGYHDTISPVLECD    200
                     ::|||..|||:|||||:.||..||:||||||.||.|||||||||.:||||
BL01203___ymf    151 VDILPEGFSHEQESMFEWLENKSGAVISYAVADIVPIGYHDTISQILECD    200

BSNT_02728___    201 PETALLLLKQTHYDQHDKPVLYSLNYFRADKFRFHVLRKRF    241
                     |||:|||||||||||:||||||||||||||||||||:||||
BL01203___ymf    201 PETSLLLLKQTHYDQNDKPVLYSLNYFRADKFRFHVVRKRF    241


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