Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02728 and BL01203
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:29
# Commandline: needle
# -asequence dna-align/BSNT_02728___ymfC.1.5803.seq
# -bsequence dna-align/BL01203___ymfC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02728___ymfC-BL01203___ymfC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02728___ymfC-BL01203___ymfC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02728___ymfC
# 2: BL01203___ymfC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 745
# Identity: 535/745 (71.8%)
# Similarity: 535/745 (71.8%)
# Gaps: 38/745 ( 5.1%)
# Score: 1816.0
#
#
#=======================================
BSNT_02728___ 1 ATGTCTACAAAAGCTGATAATCGGCACTTGTATTTGAAAGTAATTGAACG 50
|||||.|.|||||||||.||||..|..||.|.|||.||.||.|||||.||
BL01203___ymf 1 ATGTCGATAAAAGCTGACAATCAACGGTTATGTTTAAAGGTGATTGATCG 50
BSNT_02728___ 51 AATTAAAGAGGATATAAAAAATGGGATCTACACT----GAGAAGGAAAAG 96
.||.|||||.|||||..||||||||.||| | ||.||.|||..|
BL01203___ymf 51 GATAAAAGATGATATTCAAAATGGGGTCT----TTTGCGAAAATGAACGG 96
BSNT_02728___ 97 CTGCCTTCTGAATTTGAGCTTTCCAAAAAGCTTGGTGTCAGCAGAGCGAC 146
||.||...||||||||||||.||.||.|.|||||||||.||||||.||.|
BL01203___ymf 97 CTCCCGAGTGAATTTGAGCTGTCAAAGATGCTTGGTGTGAGCAGAACGGC 146
BSNT_02728___ 147 GCTAAGAGAAGC-CTTGCGGATACTGGAAGAAGAGCATGTGATTATCAGA 195
..|..|.||.|| ||| .|.||||||||||||||..|.||.||.||||||
BL01203___ymf 147 TTTGCGTGAGGCGCTT-AGAATACTGGAAGAAGAAAACGTCATCATCAGA 195
BSNT_02728___ 196 AGGCATGGTGTAGGCAC-TTTTGTCCATTCTAAGCCGTTATTTCTTTCGG 244
||||||||.||.|| || ||||||..||.|.|..|||||||||||.||.|
BL01203___ymf 196 AGGCATGGAGTCGG-ACATTTTGTAAATGCCAGACCGTTATTTCTATCAG 244
BSNT_02728___ 245 GCATTGAACAGCTGAACAGTGTAACCAAGATGATAGAACAGGCGAATATG 294
|.|||||.|||||||||||.||.||.||.|||||.||.|||||.|..|||
BL01203___ymf 245 GTATTGAGCAGCTGAACAGCGTCACAAAAATGATCGAGCAGGCAAGCATG 294
BSNT_02728___ 295 ACCCCTGGCACGATTTTTCTATCATCACAAGT----GCTTATGCCGTCTG 340
||.||.||.||.||||||.|.||.|||||.|| ||| ||..|||
BL01203___ymf 295 ACGCCGGGAACCATTTTTATGTCCTCACAGGTTACCGCT----CCCACTG 340
BSNT_02728___ 341 AAGATGATACGAAGAGATTTCATTTGGCAGAAG--GGCAAGAACTTTTTT 388
||||.||||.|....|.|||||.|..||.|||| ..|.|||.||||||
BL01203___ymf 341 AAGAAGATATGCTCCGGTTTCAATATGCGGAAGAAACCGAGATCTTTTT- 389
BSNT_02728___ 389 ACCTTGAACGAGTCAGGACAGCTGACGGACAGCCGATTGTGTATTGTATA 438
.|||||.||.||.||.||.||..|.|||..||||.||||.||.|||.|.
BL01203___ymf 390 -GCTTGAGCGGGTGAGAACGGCAAATGGAATGCCGGTTGTCTACTGTCTT 438
BSNT_02728___ 439 GACAAAATTCCGATGAATATTTTGCC-GAATTCTTTTTCTCATCAGCAAG 487
||.|||||.||..||.|.|||.|.|| |||..| |||||.||..||||.|
BL01203___ymf 439 GATAAAATACCTGTGGACATTCTCCCGGAAGGC-TTTTCACACGAGCAGG 487
BSNT_02728___ 488 AATCTATGTTTGACCTTCTTGAGAAAAATTCAGGCTCCGTAATCAGCTAT 537
|.||.||||||||....||||||||.||.||.|||.||||.||||||||.
BL01203___ymf 488 AGTCGATGTTTGAATGGCTTGAGAACAAATCCGGCGCCGTGATCAGCTAC 537
BSNT_02728___ 538 GCAGTAACTGATATAGAACCGATCGGCTATCACGATACCATTTCTCCAGT 587
||.||..|.|||||.|..||.|||||.|||||.||.||||||||.|.|.|
BL01203___ymf 538 GCTGTTGCCGATATTGTGCCAATCGGATATCATGACACCATTTCCCAAAT 587
BSNT_02728___ 588 ACTTGAATGCGATCCGGAAACAGCCCTTT--TGCTGTTAAAACAAACCCA 635
.||||||||||||||.||||| ..|||| |||||.|.|||||.||.||
BL01203___ymf 588 TCTTGAATGCGATCCTGAAAC--GTCTTTGCTGCTGCTCAAACAGACTCA 635
BSNT_02728___ 636 TTACGATCAGCACGATAAACCGGTGCTTTATTCTTTAAATTATTTTAGAG 685
|||.||.||..|||||||.||.||..|.|||||||||||.||||||||.|
BL01203___ymf 636 TTATGACCAAAACGATAAGCCCGTTTTATATTCTTTAAACTATTTTAGGG 685
BSNT_02728___ 686 CGGATAAATTCAGATTTCATGTTTTGCGT----AAACGATTCTAA 726
|.|||||||||||||||||||| ||| |||||.||.|.|
BL01203___ymf 686 CCGATAAATTCAGATTTCATGT----CGTCAGAAAACGTTTTTGA 726
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