Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02737 and BL01196

See DNA alignment / Visit BSNT_02737 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:29
# Commandline: needle
#    -asequence pep-align/BSNT_02737.1.5803.seq
#    -bsequence pep-align/BL01196.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02737-BL01196.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02737-BL01196.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02737
# 2: BL01196
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 308
# Identity:     206/308 (66.9%)
# Similarity:   249/308 (80.8%)
# Gaps:          12/308 ( 3.9%)
# Score: 1017.5
# 
#
#=======================================

BSNT_02737         1 MTELGIRLKEAREEKAMSLDDLQAATKIQKRYLTALEEGNYDIIPGKFYV     50
                     |||||.|||||||||.||||||||||||||||||||||||||||||||||
BL01196            1 MTELGNRLKEAREEKGMSLDDLQAATKIQKRYLTALEEGNYDIIPGKFYV     50

BSNT_02737        51 RAFIKQYAEAVGLDADQLFEEHKKDIPNTYHDDVSEKISGMNLQKEMPKP    100
                     ||||||||||||||::.||||.||||||:|:|:||||:|.:..|:|:||.
BL01196           51 RAFIKQYAEAVGLDSEHLFEEFKKDIPNSYNDEVSEKLSSIKPQRELPKS    100

BSNT_02737       101 ASKALELLPTILVILGVIVVIAIVYAIIQFANHKNSDDHNAASEKAITQS    150
                     ||||||||||:||..||||||||:|.|:|..|  ...:..|...|. .:|
BL01196          101 ASKALELLPTLLVAAGVIVVIAIIYVIVQAVN--GGGNQQAEGPKT-EES    147

BSNT_02737       151 ESKYEIPKDSTL-KENQNNSSEKETDTKKETKENEDKKKE---NDSDKLE    196
                     :|||::.|||.| ||||.|     ||.:|::.|.:.:||:   :::|||.
BL01196          148 QSKYDVSKDSPLTKENQQN-----TDAQKDSAEGDKEKKDQQSDENDKLT    192

BSNT_02737       197 IKVAGTEGSLTTYEVSGADKIELELKASDSSWIRVRDENSSSLKEGTLKK    246
                     ||...:|||.|||||||:||:|||:|||::||:|||||..||||||.:||
BL01196          193 IKATASEGSSTTYEVSGSDKLELEVKASENSWVRVRDEKGSSLKEGMMKK    242

BSNT_02737       247 DETYKKDITDQKQVDIRTGYAPNLKIKINGKVLSYELDPKKVMAQTIKIV    296
                     .||::|:||||.|:|:|.||||.::|||||:||||:||||.||.|.|.|.
BL01196          243 GETFQKNITDQSQIDLRIGYAPGVEIKINGEVLSYKLDPKTVMTQNITIQ    292

BSNT_02737       297 NKKEEKSS    304
                     ||||||||
BL01196          293 NKKEEKSS    300


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.