Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02737 and BL01196
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:29
# Commandline: needle
# -asequence dna-align/BSNT_02737.1.5803.seq
# -bsequence dna-align/BL01196.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02737-BL01196.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02737-BL01196.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02737
# 2: BL01196
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 942
# Identity: 659/942 (70.0%)
# Similarity: 659/942 (70.0%)
# Gaps: 66/942 ( 7.0%)
# Score: 2232.5
#
#
#=======================================
BSNT_02737 1 GTGACTGAACTAGGAATCCGGCTCAAAGAAGCCAGAGAGGAAAAAGCAAT 50
||||||||||||||||..|||||.||||||||||||||||||||||..||
BL01196 1 GTGACTGAACTAGGAAATCGGCTGAAAGAAGCCAGAGAGGAAAAAGGGAT 50
BSNT_02737 51 GTCATTGGATGATCTCCAAGCGGCAACAAAGATTCAAAAAAGGTATTTAA 100
|||||||||.||.||.||.|||||.||||||||.||||||||||||||||
BL01196 51 GTCATTGGACGACCTTCAGGCGGCCACAAAGATCCAAAAAAGGTATTTAA 100
BSNT_02737 101 CCGCCTTGGAGGAAGGAAACTATGACATTATTCCGGGGAAGTTTTATGTT 150
|.|||.|.||.||||||||||||||.||.|||||||||||.||||||||.
BL01196 101 CGGCCCTTGAAGAAGGAAACTATGATATCATTCCGGGGAAATTTTATGTG 150
BSNT_02737 151 CGGGCATTCATCAAGCAATATGCAGAAGCCGTTGGGCTTGATGCGGATCA 200
.||||.||.||||||||.||.||.|||||.||.||.||.||..||||.||
BL01196 151 AGGGCTTTTATCAAGCAGTACGCCGAAGCTGTCGGCCTCGACTCGGAGCA 200
BSNT_02737 201 GCTGTTTGAGGAGCATAAAAAAGATATCCCTAATACGTATCATGACGATG 250
..|||||||.|||..|||||||||||||||||||.|.||..||||.||.|
BL01196 201 CTTGTTTGAAGAGTTTAAAAAAGATATCCCTAATTCTTACAATGATGAGG 250
BSNT_02737 251 TGTCTGAAAAGATCTCCGGCATGAATCTTCAAAAGGAAATGCCGAAGCCA 300
|.|||||.|||.|.||....||.||.|..||.|.|||..|.||.|||.|.
BL01196 251 TTTCTGAGAAGCTTTCTTCAATCAAGCCGCAGAGGGAGCTTCCCAAGTCT 300
BSNT_02737 301 GCATCTAAGGCGCTGGAGCTGCTGCCAACGATACTTGTTATTCTCGGCGT 350
||.||.||.|||||.||.||..||||.||..|.|||||......||||||
BL01196 301 GCCTCAAAAGCGCTTGAACTTTTGCCCACCTTGCTTGTGGCAGCCGGCGT 350
BSNT_02737 351 GATTGTCGTGATTGCCATTGTGTACGCGATCATTCAGTTTGCCAATCACA 400
.||.||.|||||.||.||..|.||||..||..|||||..||
BL01196 351 TATCGTTGTGATCGCGATCATTTACGTCATTGTTCAGGCTG--------- 391
BSNT_02737 401 AAAAC-----AGTGATGATCACAATGC-----GGCATCAGAAAAAGCAAT 440
.|||| ||.|| ||||..|.|| |||.|.|.|.|.||.|||
BL01196 392 TAAACGGCGGAGGGA--ATCAGCAGGCTGAAGGGCCTAAAACAGAGGAAT 439
BSNT_02737 441 TACGCAAAGTGAGAGCAAGTACGAAATCCCTAAAGATTCAACGCTG---A 487
||||| |||||||||||..||.|.||||||||..||||| |
BL01196 440 --CGCAA------AGCAAGTACGACGTCTCAAAAGATTCCCCGCTGACTA 481
BSNT_02737 488 AAGAGAATCAAAATAACA-----GCTCTGAAAAAGAGACAGACACTAAAA 532
|.||.||||||.|.|||| ||.|.||| |||||| |.||
BL01196 482 AGGAAAATCAACAGAACACGGATGCGCAGAA----AGACAG-CGCT---- 522
BSNT_02737 533 AAGAA----ACGAAAGAAAACGAAGATAAGAAAAAAGAAAATGACAGTGA 578
||| || ||||||||..|.|||.||.|....| ||||.|..||
BL01196 523 --GAAGGCGAC-AAAGAAAAAAAGGATCAGCAGTCTG---ATGAGAACGA 566
BSNT_02737 579 TAAGCTGGAGATTAAAGTTGCTGGCACTGAAGGATCGTTAACGACTTATG 628
.||||||...|||||||...|.|..|..|||||.||.|..||.||.||||
BL01196 567 CAAGCTGACCATTAAAGCGACCGCAAGCGAAGGCTCTTCCACAACCTATG 616
BSNT_02737 629 AAGTGTCCGGCGCTGATAAAATCGAGCTGGAACTGAAGGCATCAGACAGC 678
||||.||.||..|.||.||..|.|||||.|||.|.||||||...||.|.|
BL01196 617 AAGTATCAGGATCCGACAAGCTGGAGCTTGAAGTAAAGGCAAGCGAAAAC 666
BSNT_02737 679 TCCTGGATTCGAGTGCGCGATGAAAACAGCAGCTCTTTAAAAGAAGGAAC 728
||.|||.|..||||||||||.||.||..|.||||||.|.||||||||||.
BL01196 667 TCATGGGTCAGAGTGCGCGACGAGAAAGGAAGCTCTCTTAAAGAAGGAAT 716
BSNT_02737 729 GCTGAAAAAAGACGAGACCTATAAAAAAGACATAACTGATCAGAAACAAG 778
|.|||||||||..||.||||.|.||||..|.|||||.|||||....|||.
BL01196 717 GATGAAAAAAGGGGAAACCTTTCAAAAGAATATAACCGATCAATCGCAAA 766
BSNT_02737 779 TTGATATCCGCACCGGATATGCACC-----TAATCTGAAAATAAAAATCA 823
|||||.|.||.|.|||||||||.|| | || ||||.|||||||
BL01196 767 TTGATTTGCGGATCGGATATGCGCCGGGCGT----TG-AAATTAAAATCA 811
BSNT_02737 824 ACGGTAAGGTTCTTTCATATGAACTTGATCCGAAAAAAGTGATGGCACAA 873
||||..|.||||||||.||..|.||.|||||.||.|..||||||.|||||
BL01196 812 ACGGAGAAGTTCTTTCTTACAAGCTCGATCCTAAGACTGTGATGACACAA 861
BSNT_02737 874 ACTATAAAGATTGTAAATAAAAAGGAAGAAAAGTCATCTTAA 915
|..||||.||||..||||||||||||.|||||||||||||||
BL01196 862 AACATAACGATTCAAAATAAAAAGGAGGAAAAGTCATCTTAA 903
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