Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02996 and BL01176

See DNA alignment / Visit BSNT_02996 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:41
# Commandline: needle
#    -asequence pep-align/BSNT_02996.1.5803.seq
#    -bsequence pep-align/BL01176___ynfC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02996-BL01176___ynfC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02996-BL01176___ynfC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02996
# 2: BL01176___ynfC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 117
# Identity:      41/117 (35.0%)
# Similarity:    61/117 (52.1%)
# Gaps:           3/117 ( 2.6%)
# Score: 183.0
# 
#
#=======================================

BSNT_02996         1 MKKVTILKASILFLAIASFHLLSIPHAFDIGHHYKAVADQQEMHEMKAGQ     50
                     |||...|:.||.||.|||.|..|:|......|..||.....|:||:..|:
BL01176___ynf      1 MKKTLFLQLSIFFLVIASLHSFSMPQMPANHHAQKAAVSGDELHELTVGK     50

BSNT_02996        51 NADDEKKSITGAFTLTALWAMAVLLLTAESKSTGYSRRRQRKKSFILAKF    100
                     ..:::.||:..:....|...:.::|..|..::...:||::..|:|:||.|
BL01176___ynf     51 YGEEKAKSLWNSLGFGAESVLLLILAAASGQAFMMNRRKEHLKAFMLAVF    100

BSNT_02996       101 YQSSYFGKLHVQHHPIM    117
                     |.||||.|.||...   
BL01176___ynf    101 YHSSYFDKAHVLKP---    114


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