Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05701 and BL01168

See DNA alignment / Visit BSNT_05701 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:49
# Commandline: needle
#    -asequence pep-align/BSNT_05701___arfM.1.5803.seq
#    -bsequence pep-align/BL01168___arfM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05701___arfM-BL01168___arfM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05701___arfM-BL01168___arfM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05701___arfM
# 2: BL01168___arfM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 159
# Identity:      98/159 (61.6%)
# Similarity:   119/159 (74.8%)
# Gaps:           5/159 ( 3.1%)
# Score: 485.0
# 
#
#=======================================

BSNT_05701___      1 MNQCDYLLFLKQLPMFNEVPLSIVETLLKNGTFIRGSCDQ-SPSFLHSQS     49
                     |::.|||||||.||||..|||.|::.|||||..|.....| |.|||||||
BL01168___arf      1 MDRFDYLLFLKNLPMFFGVPLPIIKKLLKNGKVIDIQPSQHSRSFLHSQS     50

BSNT_05701___     50 VYIVLKGSVRFMDTRLPEGSKTVALWEKGDVFPIDEKGGLYLSPFISVNA     99
                     ||.||||.|.|.|.||||.|:|:|.||||||||||:||..:||||||||.
BL01168___arf     51 VYFVLKGEVHFSDRRLPEESRTIAEWEKGDVFPIDQKGEPFLSPFISVNT    100

BSNT_05701___    100 TSDILILNIPYYIFKKMMSYHPQLQMNFLAMLQQNVFCSYQLFLRYLHTS    149
                     .|:..:|.||::.|||||:|:.|||.|||.:||||:|.|||||||||::|
BL01168___arf    101 ASETAVLEIPFHNFKKMMTYNRQLQTNFLMLLQQNLFFSYQLFLRYLNSS    150

BSNT_05701___    150 QDENAEPGS    158
                     .:::.    
BL01168___arf    151 AEDDV----    155


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