Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04044 and BL01152
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:05
# Commandline: needle
# -asequence pep-align/BSNT_04044___safA.1.5803.seq
# -bsequence pep-align/BL01152___safA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04044___safA-BL01152___safA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04044___safA-BL01152___safA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04044___safA
# 2: BL01152___safA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 397
# Identity: 186/397 (46.9%)
# Similarity: 232/397 (58.4%)
# Gaps: 57/397 (14.4%)
# Score: 808.5
#
#
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BSNT_04044___ 1 MKIHIVQKGDSLWKIAEKYGVDVEEVKKLNTQLSNPDLIMPGMKIKVPSE 50
||||||||||||.||||:|.||.||:||||:||||||||||||||||||.
BL01152___saf 1 MKIHIVQKGDSLEKIAERYEVDFEELKKLNSQLSNPDLIMPGMKIKVPSG 50
BSNT_04044___ 51 GVPVRKEPKAGKSPAAGSVKQEHPYAKEKPKSVVDVEDTKPKEKKSMPYV 100
||||:||.:..........:||||:|||||||.:||||.|||||.|:|||
BL01152___saf 51 GVPVKKEEQLNMRKELPKKQQEHPFAKEKPKSKLDVEDIKPKEKPSVPYV 100
BSNT_04044___ 101 PPMPNLQENVYPEADV-NDYYDMKQLFQPWSPPKPEEPKKHHDGNMDHMY 149
||:||:.::..||.|: |.|..:.||.||:.||||.| |.....:||
BL01152___saf 101 PPVPNIGQSSLPEGDISNLYQSVNQLHQPYVPPKPYE----HQEKGPNMY 146
BSNT_04044___ 150 HMQDQFP-QQEAMSNMENANYPNMPNMPKAPEVGGVEEENVH-HTVPNMP 197
: | ..|..::|||.|| ||:|:.|.||...:||.. |.:||:
BL01152___saf 147 N-----PWTNEEENHMENVNY---PNVPQPPNVGAAGDENKQFHGMPNV- 187
BSNT_04044___ 198 MPAVQPYYH--YPAHFVP--CPVPVSPIFPGSGLCYPYYPAQAYPMHPMH 243
|...|:| ||..|.| |.:||||:.||||||:|:|| ||....:
BL01152___saf 188 --AAAGYHHHPYPYPFYPGGCWIPVSPVLPGSGLCHPWYP---YPAQMPY 232
BSNT_04044___ 244 GYQPGFVSP-QYDPGYENQHHENSHHGHYGSYGAPQYASPAYGSPYGHMP 292
.:||.:||| :||.. :|..|:|: ||:|.:..|..| |||. |
BL01152___saf 233 MHQPSYVSPAEYDDD-DNMGHDNA--GHHGYHHQPMTA-PAYA------P 272
BSNT_04044___ 293 YGPY--YGTPQVMGAYQPAAAHGYMPYKDHDDCGCDGDHQPYFSAPGHSG 340
|.|: :..|.|..|..|..||| ..||||| .||...
BL01152___saf 273 YQPFPGFAPPNVGHAGDPNMAHG-----KEDDCGC---------GPGQFP 308
BSNT_04044___ 341 MGAYGSPNMPYGTANPNPNPYSAGVSMPMTNQPSVNQMFGRPEEENE 387
.|..|: .|||.......||..| ....||:..|||.|||::.:
BL01152___saf 309 GGFPGA--APYGQMPQMGAPYGMG---GYGQQPAGGQMFNRPEDDED 350
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